[med-svn] [Git][med-team/gatb-core][upstream] New upstream version 1.4.1+git20181225.44d5a44+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / gatb-core


Commits:
ed2f52b0 by Andreas Tille at 2019-01-24T10:26:10Z
New upstream version 1.4.1+git20181225.44d5a44+dfsg
- - - - -


30 changed files:

- + gatb-core/.gitignore
- gatb-core/cmake/CppUnit.cmake
- + gatb-core/doc/book/.gitignore
- gatb-core/examples/bank/bank18.cpp
- + gatb-core/examples/protos/histo2D.cpp
- gatb-core/src/gatb/bank/api/Sequence.hpp
- + gatb-core/src/gatb/bcalm2/.gitignore
- gatb-core/src/gatb/bcalm2/bglue_algo.cpp
- gatb-core/src/gatb/bcalm2/bglue_algo.hpp
- gatb-core/src/gatb/bcalm2/ograph.cpp
- gatb-core/src/gatb/bcalm2/unionFind.hpp
- gatb-core/src/gatb/debruijn/impl/Graph.cpp
- gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp
- gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp
- gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp
- gatb-core/src/gatb/debruijn/impl/Simplifications.cpp
- gatb-core/src/gatb/debruijn/impl/Simplifications.hpp
- gatb-core/src/gatb/debruijn/impl/Traversal.cpp
- gatb-core/src/gatb/kmer/impl/Configuration.cpp
- gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp
- gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp
- gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp
- + gatb-core/src/gatb/tools/misc/api/Data.cpp
- gatb-core/src/gatb/tools/misc/api/Data.hpp
- gatb-core/src/gatb/tools/misc/api/IHistogram.hpp
- gatb-core/src/gatb/tools/misc/api/StringsRepository.hpp
- gatb-core/src/gatb/tools/misc/impl/Histogram.hpp
- gatb-core/test/benchmark/CMakeLists.txt
- + gatb-core/test/benchmark/bench_bagfile.cpp
- gatb-core/test/benchmark/bench_minim.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/gatb-core/commit/ed2f52b0aba4bda12169e5c56362098519eb573c

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View it on GitLab: https://salsa.debian.org/med-team/gatb-core/commit/ed2f52b0aba4bda12169e5c56362098519eb573c
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