[med-svn] [Git][med-team/ugene][upstream] New upstream version 1.31.1+dfsg

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / ugene


Commits:
ff48318e by Andreas Tille at 2019-01-25T22:08:47Z
New upstream version 1.31.1+dfsg
- - - - -


30 changed files:

- .gitignore
- .gitmodules
- .travis.yml
- CMakeLists.txt
- README.md
- build.txt
- data/DBXRefRegistry.txt
- + data/adapters/illumina/NexteraPE-PE.fa
- + data/adapters/illumina/TruSeq2-PE.fa
- + data/adapters/illumina/TruSeq2-SE.fa
- + data/adapters/illumina/TruSeq3-PE-2.fa
- + data/adapters/illumina/TruSeq3-PE.fa
- + data/adapters/illumina/TruSeq3-SE.fa
- data/workflow_samples/Alignment/basic_align.uwl
- data/workflow_samples/Alignment/extract_msa_consensus_as_seq.uwl
- data/workflow_samples/Alignment/extract_msa_consensus_as_text.uwl
- data/workflow_samples/Conversions/faqual2fastq.uwl
- data/workflow_samples/Conversions/msa2clustal.uwl
- data/workflow_samples/Conversions/query2alignment.uwl
- data/workflow_samples/Conversions/seq2gen.uwl
- data/workflow_samples/Custom elements/script-dump-sequence-info.uwl
- data/workflow_samples/Custom elements/script-linkdata-fetch-seq.uwl
- data/workflow_samples/Custom elements/script-quality-filter.uwl
- data/workflow_samples/Data merging/find-substrings.uwl
- data/workflow_samples/Data merging/tfbs.uwl
- data/workflow_samples/HMMER/build-test-HMM.uwl
- data/workflow_samples/HMMER/searchHMM.uwl
- − data/workflow_samples/NGS/assembly/spades_paired.uwl
- − data/workflow_samples/NGS/assembly/spades_single.uwl
- data/workflow_samples/NGS/chipseq_coverage.uwl


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ugene/commit/ff48318ef51fe31697ebb369cc1b87103b16b0e8

-- 
View it on GitLab: https://salsa.debian.org/med-team/ugene/commit/ff48318ef51fe31697ebb369cc1b87103b16b0e8
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20190125/e97dd623/attachment-0001.html>