[med-svn] [Git][med-team/mcl][master] Add the Skunavirus FASTA file

Saira Hussain gitlab at salsa.debian.org
Thu Jul 11 12:21:35 BST 2019



Saira Hussain pushed to branch master at Debian Med / mcl


Commits:
1d6ed396 by Saira Hussain at 2019-07-11T11:21:05Z
Add the Skunavirus FASTA file

Use NCBI database to get an inclusive FASTA file of the Skunavirus

- - - - -


2 changed files:

- + debian/tests/data/README
- + debian/tests/data/skunavirus.fasta


Changes:

=====================================
debian/tests/data/README
=====================================
@@ -0,0 +1,5 @@
+In order to get a FASTA file from all the Skunavirus genomes, the NCBI database was used:
+
+https://www.ncbi.nlm.nih.gov/labs/virus/vssi/#/virus?SeqType_s=Nucleotide&VirusLineage_ss=Skunavirus,%20taxid:1623305
+
+Select Download, Select Data Type (Sequence Data/FASTA Format)


=====================================
debian/tests/data/skunavirus.fasta
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/mcl/commit/1d6ed3962f21cc161f98100186cc69a18bc3ff55

-- 
View it on GitLab: https://salsa.debian.org/med-team/mcl/commit/1d6ed3962f21cc161f98100186cc69a18bc3ff55
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