[med-svn] [Git][med-team/mindthegap][master] Latest push with respect to testing

[Shayan Doust]

Shayan Doust pushed to branch master at Debian Med / mindthegap


Commits:
c6b03820 by Shayan Doust at 2019-07-11T07:11:48Z
Latest push with respect to testing

- - - - -


3 changed files:

- debian/mindthegap-examples.install
- debian/mindthegap.install
- debian/tests/run-unit-test


Changes:

=====================================
debian/mindthegap-examples.install
=====================================
@@ -1,4 +1,4 @@
+test usr/share/doc/mindthegap/examples
+data usr/share/doc/mindthegap/examples
 scripts usr/share/doc/mindthegap
-test/scripts usr/share/doc/mindthegap
-test/vde.py usr/share/doc/mindthegap
 


=====================================
debian/mindthegap.install
=====================================
@@ -1,19 +1,3 @@
-test/contig_test/README usr/share/doc/mindthegap/contig_test
-test/full_test/README usr/share/doc/mindthegap/full_test
-test/reads usr/share/mindthegap/test
-test/references usr/share/mindthegap/test
-test/truths usr/share/mindthegap/test
-test/*.sh usr/share/mindthegap/test
-test/eval.cpp usr/share/mindthegap/test
-test/contig_test/*.fasta usr/share/mindthegap/test/contig_test
-test/contig_test/*.info.txt usr/share/mindthegap/test/contig_test
-test/contig_test/*gfa usr/share/mindthegap/test/contig_test
-test/contig_test/*.log usr/share/mindthegap/test/contig_test
-test/full_test/*.fasta usr/share/mindthegap/test/full_test
-test/full_test/*.breakpoints usr/share/mindthegap/test/full_test
-test/full_test/*.output usr/share/mindthegap/test/full_test
-test/full_test/*.*.vcf usr/share/mindthegap/test/full_test
-data usr/share/mindthegap
 CHANGELOG.md usr/share/doc/mindthegap
 README.md usr/share/doc/mindthegap
 debian/tmp/usr/bin/MindTheGap usr/bin


=====================================
debian/tests/run-unit-test
=====================================
@@ -5,18 +5,13 @@ pkg=mindthegap
 
 if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
   AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
-  # Double quote below to expand the temporary directory variable now versus
-  # later is on purpose.
-  # shellcheck disable=SC2064
   trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
 fi
 
-cp -r /usr/share/mindthegap/test "${AUTOPKGTEST_TMP}"
-cp -r /usr/share/mindthegap/data "${AUTOPKGTEST_TMP}"
+cp -r /usr/share/doc/mindthegap/examples "${AUTOPKGTEST_TMP}"
 
-cd "${AUTOPKGTEST_TMP}"/test
+cd "${AUTOPKGTEST_TMP}"/examples/test
 
-#do_stuff_to_test_package#
 echo "Invoking simple_test.sh:"
 bash simple_test.sh
 echo "Invoking simple_full_test.sh:"



View it on GitLab: https://salsa.debian.org/med-team/mindthegap/commit/c6b03820c4252e7703eada31b5bade3ddb54dd66

-- 
View it on GitLab: https://salsa.debian.org/med-team/mindthegap/commit/c6b03820c4252e7703eada31b5bade3ddb54dd66
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