[med-svn] [Git][med-team/spoa][master] 6 commits: New upstream version 3.0.0

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / spoa


Commits:
5a2e4f4a by Andreas Tille at 2019-07-12T19:06:19Z
New upstream version 3.0.0
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b4a493d9 by Andreas Tille at 2019-07-12T19:06:20Z
Update upstream source from tag 'upstream/3.0.0'

Update to upstream version '3.0.0'
with Debian dir 0e8b16b6e0672eb84fbd93c65f39f0ce958086fe
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e6a81779 by Andreas Tille at 2019-07-12T19:06:20Z
New upstream version

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75eb20c3 by Andreas Tille at 2019-07-12T19:06:23Z
Standards-Version: 4.4.0

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6c649a05 by Andreas Tille at 2019-07-12T19:35:34Z
Adapt patches

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e7c4827b by Andreas Tille at 2019-07-12T19:45:59Z
Needs newer version of libbioparser-dev

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18 changed files:

- CMakeLists.txt
- README.md
- debian/changelog
- debian/control
- − debian/patches/no_march.patch
- debian/patches/series
- debian/patches/shared_and_static.patch
- debian/patches/use_debian_packaged_libs.patch
- debian/rules
- include/spoa/alignment_engine.hpp
- include/spoa/graph.hpp
- src/alignment_engine.cpp
- src/graph.cpp
- src/main.cpp
- src/sequence.cpp
- src/sequence.hpp
- src/simd_alignment_engine.cpp
- src/simd_alignment_engine.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/spoa/compare/a1bf52d5a7d5a4d68c2240837815ccebb690c539...e7c4827bc15d638b456337d2ccf288381a0036cb

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View it on GitLab: https://salsa.debian.org/med-team/spoa/compare/a1bf52d5a7d5a4d68c2240837815ccebb690c539...e7c4827bc15d638b456337d2ccf288381a0036cb
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