[med-svn] [Git][med-team/q2-taxa][master] Initial packaging

Liubov Chuprikova gitlab at salsa.debian.org
Sun Jul 14 12:42:41 BST 2019



Liubov Chuprikova pushed to branch master at Debian Med / q2-taxa


Commits:
ed7144e0 by Liubov Chuprikova at 2019-07-14T11:42:10Z
Initial packaging

- - - - -


8 changed files:

- + debian/changelog
- + debian/compat
- + debian/control
- + debian/copyright
- + debian/rules
- + debian/source/format
- + debian/upstream/metadata
- + debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -0,0 +1,5 @@
+q2-taxa (2019.4.0-1) UNRELEASED; urgency=medium
+
+  * Initial release (Closes: #<bug>)
+
+ -- Liubov Chuprikova <chuprikovalv at gmail.com>  Sat, 13 Jul 2019 22:45:07 +0200


=====================================
debian/compat
=====================================
@@ -0,0 +1 @@
+12


=====================================
debian/control
=====================================
@@ -0,0 +1,37 @@
+Source: q2-taxa
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Liubov Chuprikova <chuprikovalv at gmail.com>
+Build-Depends: debhelper (>= 12~)
+Standards-Version: 4.3.0
+Vcs-Browser: https://salsa.debian.org/med-team/q2-taxa
+Vcs-Git: https://salsa.debian.org/med-team/q2-taxa.git
+Homepage: https://qiime2.org/
+
+Package: q2-taxa
+Architecture: all
+Depends: ${shlibs:Depends},
+         ${misc:Depends}
+Description: QIIME 2 plugin for working with feature taxonomy annotations
+ QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
+ package with a focus on data and analysis transparency. QIIME 2 enables
+ researchers to start an analysis with raw DNA sequence data and finish with
+ publication-quality figures and statistical results.
+ Key features:
+  * Integrated and automatic tracking of data provenance
+  * Semantic type system
+  * Plugin system for extending microbiome analysis functionality
+  * Support for multiple types of user interfaces (e.g. API, command line,
+ graphical)
+ .
+ QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
+ pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
+ retaining the features that makes QIIME 1 a powerful and widely-used analysis
+ pipeline.
+ .
+ QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
+ New functionality will regularly become available through QIIME 2 plugins. You
+ can view a list of plugins that are currently available on the QIIME 2 plugin
+ availability page. The future plugins page lists plugins that are being
+ developed.


=====================================
debian/copyright
=====================================
@@ -0,0 +1,16 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: <pkg>
+Source: <path_to_download>
+Comment: **** Before manually editing this file you should give ****
+           scan-copyrights
+         **** available in cme + lib-config-model-dpkg-perl     ****
+         **** package a try.  For existing copyright files try  ****
+           cme update dpkg-copyright
+
+Files: *
+Copyright: 20xx-20yy <upstream>
+License: <license>
+
+Files: debian/*
+Copyright: 2019 <your_ID>
+License: <license>


=====================================
debian/rules
=====================================
@@ -0,0 +1,31 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+export LC_ALL=C.UTF-8
+
+include /usr/share/dpkg/default.mk
+# this provides:
+# DEB_SOURCE: the source package name
+# DEB_VERSION: the full version of the package (epoch + upstream vers. + revision)
+# DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision
+# DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch
+# DEB_VERSION_UPSTREAM: the package's upstream version
+# DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog
+# SOURCE_DATE_EPOCH: the source release date as seconds since the epoch, as
+#                    specified by <https://reproducible-builds.org/specs/source-date-epoch/>
+
+# for hardening you might like to uncomment this:
+# export DEB_BUILD_MAINT_OPTIONS=hardening=+all
+
+%:
+	dh $@
+
+### When overriding auto_test make sure DEB_BUILD_OPTIONS will be respected
+#override_dh_auto_test:
+#ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
+#	do_stuff_for_testing
+#endif
+
+### If you **really** can not use uscan (even not with mode=git) use a debian/get-orig-script
+#get-orig-source:
+#	. debian/get-orig-source


=====================================
debian/source/format
=====================================
@@ -0,0 +1 @@
+3.0 (quilt)


=====================================
debian/upstream/metadata
=====================================
@@ -0,0 +1,12 @@
+Reference:
+  Author: 
+  Title: 
+  Journal: 
+  Year: 
+  Volume: 
+  Number: 
+  Pages: 
+  DOI: 
+  PMID:
+  URL: 
+  eprint: 


=====================================
debian/watch
=====================================
@@ -0,0 +1,3 @@
+version=4
+
+https://github.com/qiime2/q2-taxa/releases/latest .*/archive/(\d[.\d]+)@ARCHIVE_EXT@



View it on GitLab: https://salsa.debian.org/med-team/q2-taxa/commit/ed7144e00c231d702286a39cdb5e6b17e96aad15

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View it on GitLab: https://salsa.debian.org/med-team/q2-taxa/commit/ed7144e00c231d702286a39cdb5e6b17e96aad15
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