[med-svn] [Git][med-team/rapmap][master] 3 commits: New upstream version 0.14.1+dfsg

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / rapmap


Commits:
100ae745 by Michael R. Crusoe at 2019-07-23T10:38:19Z
New upstream version 0.14.1+dfsg
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54723e69 by Michael R. Crusoe at 2019-07-23T10:38:22Z
Update upstream source from tag 'upstream/0.14.1+dfsg'

Update to upstream version '0.14.1+dfsg'
with Debian dir 1ccb265f71506b7bc700d9f80889161f5ab5cab5
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06fa125c by Michael R. Crusoe at 2019-07-23T10:52:45Z
0.14.1+dfsg-1

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29 changed files:

- CMakeLists.txt
- README.md
- + current_version.txt
- debian/changelog
- debian/control
- debian/patches/no_gomp_needed
- debian/patches/use-debian-libs.patch
- debian/patches/use_shared_libs.patch
- debian/rules
- include/HitManager.hpp
- include/RapMapSAIndex.hpp
- include/RapMapUtils.hpp
- include/SACollector.hpp
- include/SASearcher.hpp
- + include/SelectiveAlignmentUtils.hpp
- + include/edlib.h
- + include/ksw2pp/KSW2Aligner.hpp
- + include/ksw2pp/kalloc.h
- + include/ksw2pp/ksw2.h
- + include/metro/metrohash.h
- + include/metro/metrohash128.h
- + include/metro/metrohash128crc.h
- + include/metro/metrohash64.h
- + include/metro/platform.h
- + include/metro/testvector.h
- + include/nonstd/optional.hpp
- include/sparsepp/spp.h
- include/sparsepp/spp_dlalloc.h
- + include/tsl/array_growth_policy.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/rapmap/compare/7d9a0732ed0fc5cd58645478e5d9843d3fa01b51...06fa125cedb14cf706d2f909bd362fd4b416d431

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View it on GitLab: https://salsa.debian.org/med-team/rapmap/compare/7d9a0732ed0fc5cd58645478e5d9843d3fa01b51...06fa125cedb14cf706d2f909bd362fd4b416d431
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