[med-svn] [Git][med-team/mmseqs2][master] Detect and write more copyright entries using decopy

[Shayan Doust]

Shayan Doust pushed to branch master at Debian Med / mmseqs2


Commits:
4b02cf2c by Shayan Doust at 2019-07-23T19:37:59Z
Detect and write more copyright entries using decopy

- - - - -


1 changed file:

- debian/copyright


Changes:

=====================================
debian/copyright
=====================================
@@ -10,6 +10,20 @@ Files: *
 Copyright: 2012 The MMseqs Development Team
 License: GPL-3
 
+Files: debian/missing-sources/userguide/eisvogel.tex
+Copyright: 2014-2019 John MacFarlane
+	   2017-2019 Pascal Wagler
+License: BSD-3-clause
+
+Files: src/alignment/DistanceCalculator.h
+       src/alignment/StripedSmithWaterman.cpp
+       src/alignment/StripedSmithWaterman.h
+Copyright: 2012-2015 Boston College
+	   2015 Michael Farrar
+	   2015 Mengyao Zhao
+	   2015 Martin Steinegger
+License: Expat
+
 Files: src/commons/A3MReader.*
 Copyright: 2013 Andrew Gallant
 License: Expat
@@ -23,7 +37,11 @@ Copyright: 2014 Milo Yip
 License: Expat
 
 Files: lib/simd/sse2neon.h
-Copyright: 2017 John W. Ratcliff, Brandon Rowlett, Ken Fast, Eric van Beurden, Alexander Potylitsin
+Copyright: 2017 John W. Ratcliff
+	   2017 Brandon Rowlett
+	   2017 Ken Fast
+	   2017 Eric van Beurden
+	   2017 Alexander Potylitsin
 License: Expat
 
 Files: lib/simd/simd.h
@@ -49,7 +67,8 @@ Copyright: 2009 Attractive Chaos <attractor at live.co.uk>
 License: Expat
 
 Files: lib/ksw2/*
-Copyright: 2018 Dana-Farber Cancer Institute, 2017-2018 Broad Institute Inc.
+Copyright: 2018 Dana-Farber Cancer Institute
+	   2017-2018 Broad Institute Inc.
 License: Expat
 
 Files: lib/omptl/*
@@ -64,6 +83,31 @@ Files: debian/*
 Copyright: 2019 Shayan Doust <hello at shayandoust.me>
 License: GPL-3
 
+License: BSD-3-clause
+ Redistribution and use in source and binary forms, with or without modification, 
+ are permitted provided that the following conditions are met:
+ .
+ 1. Redistributions of source code must retain the above copyright notice, this 
+ list of conditions and the following disclaimer.
+ .
+ 2. Redistributions in binary form must reproduce the above copyright notice, this 
+ list of conditions and the following disclaimer in the documentation and/or 
+ other materials provided with the distribution.
+ .
+ 3. Neither the name of the copyright holder nor the names of its contributors may 
+ be used to endorse or promote products derived from this software without specific 
+ prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY 
+ EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES 
+ OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT 
+ SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, 
+ INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED 
+ TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 
+ INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
+ LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE 
+ USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
 License: Expat
  Permission is hereby granted, free of charge, to any person obtaining a
  copy of this software and associated documentation files (the "Software"),



View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/commit/4b02cf2caa400ab72f8c69aa919c6b15355dc5c7

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View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/commit/4b02cf2caa400ab72f8c69aa919c6b15355dc5c7
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