[med-svn] [Git][med-team/toil][upstream] New upstream version 3.21.0

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / toil


Commits:
05e4af94 by Michael R. Crusoe at 2019-11-17T13:37:43Z
New upstream version 3.21.0
- - - - -


30 changed files:

- .gitlab-ci.yml
- Makefile
- README.rst
- docker/Dockerfile.py
- docs/appendices/architecture.rst
- + docs/appendices/aws_min_permissions.rst
- docs/appendices/environment_vars.rst
- docs/appendices/staticAzure.rst
- docs/contributing/contributing.rst
- docs/developingWorkflows/developing.rst
- docs/developingWorkflows/toilAPIFilestore.rst
- docs/gettingStarted/install.rst
- docs/gettingStarted/quickStart.rst
- docs/index.rst
- docs/running/cliOptions.rst
- docs/running/cloud/amazon.rst
- docs/running/cloud/azure.rst
- docs/running/cloud/cloud.rst
- docs/running/cloud/gce.rst
- docs/running/cwl.rst
- docs/running/debugging.rst
- docs/running/introduction.rst
- docs/running/wdl.rst
- + examples
- run_tests.py
- setup.py
- + setup_gitlab_ssh.py
- src/toil/__init__.py
- src/toil/batchSystems/abstractBatchSystem.py
- src/toil/batchSystems/gridengine.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/toil/commit/05e4af949bca37ffb531a3ad1f15e2fe55bfc168

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