[med-svn] [Git][med-team/bbmap][master] 7 commits: Files-Excluded: *.o *.dylib

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / bbmap


Commits:
29c0e329 by Andreas Tille at 2019-11-22T20:30:41Z
Files-Excluded: *.o *.dylib

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9c6d2b20 by Andreas Tille at 2019-11-22T20:31:22Z
New upstream version

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765cf20a by Andreas Tille at 2019-11-22T20:31:24Z
New upstream version 38.73+dfsg
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bbbdec9f by Andreas Tille at 2019-11-22T20:31:36Z
Update upstream source from tag 'upstream/38.73+dfsg'

Update to upstream version '38.73+dfsg'
with Debian dir 09c7ded71cbd93852de5b5c65a8ec1a6e07683c7
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9bbd6a39 by Andreas Tille at 2019-11-22T20:31:40Z
Standards-Version: 4.4.1

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061c7519 by Andreas Tille at 2019-11-22T20:31:46Z
Use secure URI in debian/watch.

Fixes lintian: debian-watch-uses-insecure-uri
See https://lintian.debian.org/tags/debian-watch-uses-insecure-uri.html for more details.

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258ce1dc by Andreas Tille at 2019-11-22T20:35:47Z
Upload to unstable

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30 changed files:

- README.md
- a_sample_mt.sh
- addadapters.sh
- + addssu.sh
- + adjusthomopolymers.sh
- analyzeaccession.sh
- + applyvariants.sh
- bbcms.sh
- bbduk.sh
- calcmem.sh
- callgenes.sh
- clumpify.sh
- comparesketch.sh
- + consensus.sh
- current/align2/AbstractMapper.java
- current/align2/BBMap.java
- current/align2/BBMap5.java
- current/align2/BBMapAcc.java
- current/align2/BBMapPacBio.java
- current/align2/BBMapPacBioSkimmer.java
- current/assemble/AbstractProcessContigThread.java
- + current/assemble/BubblePopper.java
- current/assemble/Contig.java
- current/assemble/Edge.java
- current/assemble/Shaver1.java
- current/assemble/Shaver2.java
- current/assemble/TadPipe.java
- current/assemble/Tadpole.java
- current/assemble/Tadpole1.java
- current/assemble/Tadpole2.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bbmap/compare/5847c0ef51474920c6bb39eb887bdef561374e1c...258ce1dc979a313307ee93326ad8764f4d9c1902

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View it on GitLab: https://salsa.debian.org/med-team/bbmap/compare/5847c0ef51474920c6bb39eb887bdef561374e1c...258ce1dc979a313307ee93326ad8764f4d9c1902
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