[med-svn] [Git][med-team/python-biotools][master] 4 commits: Drop Python2 support

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / python-biotools


Commits:
3faf0f04 by Andreas Tille at 2019-09-04T12:43:55Z
Drop Python2 support

- - - - -
e623b0c8 by Andreas Tille at 2019-09-04T12:44:35Z
debhelper-compat 12

- - - - -
c79a7919 by Andreas Tille at 2019-09-04T12:44:39Z
Standards-Version: 4.4.0

- - - - -
3e619a33 by Andreas Tille at 2019-09-04T12:45:36Z
Upload to unstable

- - - - -


4 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+python-biotools (1.2.12-4) unstable; urgency=medium
+
+  * Drop Python2 support
+    Closes: #937607
+  * debhelper-compat 12
+  * Standards-Version: 4.4.0
+
+ -- Andreas Tille <tille at debian.org>  Wed, 04 Sep 2019 14:44:40 +0200
+
 python-biotools (1.2.12-3) unstable; urgency=medium
 
   * Testsuite: autopkgtest-pkg-python


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -4,41 +4,14 @@ Uploaders: Andreas Tille <tille at debian.org>
 Section: python
 Testsuite: autopkgtest-pkg-python
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 12),
                dh-python,
-               python-all,
                python3-all
-Standards-Version: 4.1.4
+Standards-Version: 4.4.0
 Vcs-Browser: https://salsa.debian.org/med-team/python-biotools
 Vcs-Git: https://salsa.debian.org/med-team/python-biotools.git
 Homepage: https://github.com/sonwell/biotools
 
-Package: python-biotools
-Architecture: all
-Depends: ${python:Depends},
-         ${misc:Depends},
-         python-numpy,
-         python-matplotlib,
-         clustalw,
-         ncbi-blast+ | ncbi-blast+-legacy
-Description: Python bioinformatics utilities for high-throughput genomic sequencing
- This package contains utilities like
-  biotools.align - align sequences (hybrid between Needleman-Wunsch and
-                   Smith-Waterman which is used to find the subsequence
-                   within a larger sequence that best aligns to a reference)
-  biotools.annotation - create annotation files. The annotations can be used
-                        to create a hierarchy among the annotations
-  biotools.BLAST - manage BLAST databases and interface with the BLAST+
-                   standalone program available from NCBI.
-  biotools.clustal - interface to clustalw global (multiple nucleotide or
-                     peptide sequence alignment)
-  biotools.complement - creates the complement of a sequence, which can then be
-                        reversed
-  biotools.sequence - various tools to deal with sequences
-  biotools.translate - translate a nucleotide using the standard genetic code
- .
- This package contains the Python 2 module.
-
 Package: python3-biotools
 Architecture: all
 Depends: ${python3:Depends},


=====================================
debian/rules
=====================================
@@ -6,9 +6,4 @@ export LC_ALL=C.UTF-8
 export PYBUILD_NAME=biotools
 
 %:
-	dh $@ --with python2,python3 --buildsystem=pybuild
-
-override_dh_install:
-	dh_install
-	# enable parallel installation by providing /usr/bin/prok-geneseek only in Python3 package
-	rm -rf debian/python-$(PYBUILD_NAME)/usr/bin
+	dh $@ --with python3 --buildsystem=pybuild



View it on GitLab: https://salsa.debian.org/med-team/python-biotools/compare/0a1da6c15659007b56e6db22b25c2cfbf5196357...3e619a33ddd04dea9b1793f8751e62a1956a2bb4

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-biotools/compare/0a1da6c15659007b56e6db22b25c2cfbf5196357...3e619a33ddd04dea9b1793f8751e62a1956a2bb4
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