[med-svn] [Git][med-team/qtltools][upstream] New upstream version 1.2+dfsg

[Dylan Aïssi]

Dylan Aïssi pushed to branch upstream at Debian Med / qtltools


Commits:
4fd8c8fc by Dylan Aïssi at 2019-09-30T06:23:01Z
New upstream version 1.2+dfsg
- - - - -


30 changed files:

- Makefile
- lib/OTools/residualizer.h
- lib/OTools/string_utils.h
- src/QTLtools.cpp
- src/common/data.h
- src/common/filter.h
- src/mode_cis/cis_data.h
- src/mode_cis/cis_main.cpp
- src/mode_cis/cis_nominal_pass.cpp
- src/mode_correct/correct_data.h
- src/mode_correct/correct_processing.cpp
- src/mode_correct/correct_read_covariates.cpp
- src/mode_fdensity/fdensity_main.cpp
- src/mode_fdensity/fdensity_process.cpp
- src/mode_genrich/genrich_process.cpp
- src/mode_genrich/genrich_read_phenotypes.cpp
- src/mode_genrich/genrich_read_reference_genotypes.cpp
- + src/mode_gwas/gwas_analysis_pass.cpp
- + src/mode_gwas/gwas_data.h
- src/mode_quan/quan_management.cpp → src/mode_gwas/gwas_initilization.cpp
- + src/mode_gwas/gwas_main.cpp
- + src/mode_gwas/gwas_managment.cpp
- + src/mode_gwas/gwas_read_covariates.cpp
- + src/mode_gwas/gwas_read_phenotypes.cpp
- src/mode_match/match_process.cpp
- − src/mode_quan/quan_chunking.cpp
- src/mode_quan/quan_data.h
- src/mode_quan/quan_main.cpp
- − src/mode_quan/quan_printResults.cpp
- src/mode_quan/quan_readBAM.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/qtltools/commit/4fd8c8fc586d3ca53ddd5efcbccc342559a7311a

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View it on GitLab: https://salsa.debian.org/med-team/qtltools/commit/4fd8c8fc586d3ca53ddd5efcbccc342559a7311a
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