[med-svn] [Git][med-team/sumaclust][master] 9 commits: New upstream version 1.0.36+ds

[Pierre Gruet]

Pierre Gruet pushed to branch master at Debian Med / sumaclust


Commits:
5f646f0d by Pierre Gruet at 2020-04-13T14:46:52+02:00
New upstream version 1.0.36+ds
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d37174bd by Pierre Gruet at 2020-04-13T14:46:52+02:00
Update upstream source from tag 'upstream/1.0.36+ds'

Update to upstream version '1.0.36+ds'
with Debian dir 4835fa255151300bf990d58f8db26982ed25be04
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db227837 by Pierre Gruet at 2020-04-13T14:49:33+02:00
Adding build-dependency on libsuma-dev

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ea81fb64 by Pierre Gruet at 2020-04-13T14:50:36+02:00
Indicating in debian/copyright that sumalibs/ was removed

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7bfac5cf by Pierre Gruet at 2020-04-13T14:53:17+02:00
Deleting now useless dh_clean override

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05aae696 by Pierre Gruet at 2020-04-13T14:55:16+02:00
Patching to use Debian packaged sumalibs

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b0ccd06e by Pierre Gruet at 2020-04-13T14:56:18+02:00
Updating debian/watch to fit new +ds version

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5134aa88 by Pierre Gruet at 2020-04-14T13:43:38+02:00
Updating copyright

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d8e90892 by Pierre Gruet at 2020-04-14T15:48:05+02:00
Updating changelog

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29 changed files:

- debian/changelog
- debian/control
- debian/copyright
- − debian/patches/reading_only_ACGT_sequences_safely.patch
- debian/patches/series
- + debian/patches/use_debian_packaged_sumalibs.patch
- debian/rules
- debian/watch
- sumaclust.c
- − sumalibs/Licence_CeCILL_V2-en.txt
- − sumalibs/Licence_CeCILL_V2-fr.txt
- − sumalibs/Makefile
- − sumalibs/libfasta/fasta_header_handler.c
- − sumalibs/libfasta/fasta_header_handler.h
- − sumalibs/libfasta/fasta_header_parser.c
- − sumalibs/libfasta/fasta_header_parser.h
- − sumalibs/libfasta/fasta_header_parser.l
- − sumalibs/libfasta/fasta_seq_writer.c
- − sumalibs/libfasta/fasta_seq_writer.h
- − sumalibs/libfasta/header_mem_handler.c
- − sumalibs/libfasta/header_mem_handler.h
- − sumalibs/libfasta/sequence.c
- − sumalibs/libfasta/sequence.h
- − sumalibs/libfile/fileHandling.c
- − sumalibs/libfile/fileHandling.h
- − sumalibs/liblcs/_lcs.ext.1.c
- − sumalibs/liblcs/_lcs.ext.2.c
- − sumalibs/liblcs/_lcs.ext.3.c
- − sumalibs/liblcs/_lcs.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/sumaclust/-/compare/9ed1406fb83945801afd149a13cef4c510e218d2...d8e908923a67ad82892185b5433b0a60eeb6f8e7

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View it on GitLab: https://salsa.debian.org/med-team/sumaclust/-/compare/9ed1406fb83945801afd149a13cef4c510e218d2...d8e908923a67ad82892185b5433b0a60eeb6f8e7
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