[med-svn] [Git][med-team/python-nanoget][master] Fix description

Andreas Tille gitlab at salsa.debian.org
Fri Apr 24 15:10:24 BST 2020



Andreas Tille pushed to branch master at Debian Med / python-nanoget


Commits:
4a499fc6 by Andreas Tille at 2020-04-24T16:10:16+02:00
Fix description

- - - - -


1 changed file:

- debian/control


Changes:

=====================================
debian/control
=====================================
@@ -28,12 +28,12 @@ Description: extract information from Oxford Nanopore sequencing data and alignm
  .
  Data can be presented in the following formats, using the following functions:
  .
-  * sorted bam file process_bam (bamfile, threads)
-  * standard fastq file process_fastq_plain (fastqfile, 'threads')
-  * fastq file with metadata from MinKNOW or Albacore process_fastq_rich
-    (fastqfile)
-  * sequencing_summary file generated by Albacore process_summary
-    (sequencing_summary.txt, 'readtype')
+  * sorted bam file process_bam(bamfile, threads)
+  * standard fastq file process_fastq_plain(fastqfile, 'threads')
+  * fastq file with metadata from MinKNOW or Albacore
+    process_fastq_rich(fastqfile)
+  * sequencing_summary file generated by Albacore
+    process_summary(sequencing_summary.txt, 'readtype')
  .
  Fastq files can be compressed using gzip, bzip2 or bgzip. The data is
  returned as a pandas DataFrame with standardized headernames for



View it on GitLab: https://salsa.debian.org/med-team/python-nanoget/-/commit/4a499fc6404dfaae93f92f74604190c8dcd23f85

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-nanoget/-/commit/4a499fc6404dfaae93f92f74604190c8dcd23f85
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200424/e935d843/attachment.html>


More information about the debian-med-commit mailing list