[med-svn] [Git][med-team/biobambam2][master] 6 commits: routine-update: New upstream version

[Étienne Mollier]

Étienne Mollier pushed to branch master at Debian Med / biobambam2


Commits:
6f510629 by Étienne Mollier at 2020-08-08T12:14:00+02:00
routine-update: New upstream version

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04cab22d by Étienne Mollier at 2020-08-08T12:14:01+02:00
New upstream version 2.0.173+ds
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d8d89cb4 by Étienne Mollier at 2020-08-08T12:14:01+02:00
Update upstream source from tag 'upstream/2.0.173+ds'

Update to upstream version '2.0.173+ds'
with Debian dir 6607e25eeb46a6a74b62610fab5bee7225108819
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6897e917 by Étienne Mollier at 2020-08-08T18:11:50+02:00
d/control: added zlib1g-dev as dependency

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46b9c4c7 by Étienne Mollier at 2020-08-08T18:16:58+02:00
d/u/metadata: filled Repository informations

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2e719615 by Étienne Mollier at 2020-08-08T18:51:15+02:00
ready for upload

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30 changed files:

- .gitignore
- ChangeLog
- configure.ac
- debian/changelog
- debian/control
- debian/upstream/metadata
- src/Makefile.am
- src/biobambam2/DepthIntervalGetter.hpp
- src/biobambam2/Reference.hpp
- src/programs/bam12auxmerge.cpp
- src/programs/bam12split.cpp
- src/programs/bam12strip.cpp
- src/programs/bamadapterclip.cpp
- src/programs/bamadapterfind.cpp
- src/programs/bamalignfrac.cpp
- src/programs/bamauxmerge.cpp
- src/programs/bamauxmerge2.cpp
- src/programs/bamauxsort.cpp
- src/programs/bamcat.cpp
- src/programs/bamclipXT.cpp
- src/programs/bamclipreinsert.cpp
- src/programs/bamcollate2.cpp
- src/programs/bamconsensus.cpp
- src/programs/bamdownsamplerandom.cpp
- src/programs/bamexondepth.cpp
- src/programs/bamexplode.cpp
- src/programs/bamexploderef.cpp
- src/programs/bamexploderg.cpp
- src/programs/bamfastcat.cpp
- src/programs/bamfastexploderef.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/biobambam2/-/compare/040581234af0a46b91d9cd5525c7ed9ad4903fac...2e7196153ede39b222b1f91110dd4c05d360b2a8

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View it on GitLab: https://salsa.debian.org/med-team/biobambam2/-/compare/040581234af0a46b91d9cd5525c7ed9ad4903fac...2e7196153ede39b222b1f91110dd4c05d360b2a8
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