[med-svn] [Git][med-team/minia][upstream] 2 commits: New upstream version 3.2.1+git20200607.bfd91a7

[Steffen Möller]

Steffen Möller pushed to branch upstream at Debian Med / minia


Commits:
aa02a815 by Steffen Moeller at 2020-08-10T19:16:20+02:00
New upstream version 3.2.1+git20200607.bfd91a7
- - - - -
82ffc645 by Steffen Moeller at 2020-08-10T19:22:06+02:00
New upstream version 3.2.4
- - - - -


2 changed files:

- CMakeLists.txt
- src/Minia.cpp


Changes:

=====================================
CMakeLists.txt
=====================================
@@ -8,7 +8,7 @@ cmake_minimum_required (VERSION 2.6)
 # The default version number is the latest official build
 SET (gatb-tool_VERSION_MAJOR 3)
 SET (gatb-tool_VERSION_MINOR 2)
-SET (gatb-tool_VERSION_PATCH 2)
+SET (gatb-tool_VERSION_PATCH 4)
 
 # But, it is possible to define another release number during a local build
 IF (DEFINED MAJOR)


=====================================
src/Minia.cpp
=====================================
@@ -250,7 +250,7 @@ string Minia::assemble (/*const, removed because Simplifications isn't const any
     if (simplifyGraph)
     {
         int nbCores = getInput()->getInt(STR_NB_CORES);
-        bool verbose=true;
+        bool verbose=false;
         Simplifications<Graph_type,Node,Edge> graphSimplifications(&graph, nbCores, verbose);
 
         if (getParser()->saw("-no-tip-removal"))
@@ -309,6 +309,7 @@ string Minia::assemble (/*const, removed because Simplifications isn't const any
     /** We gather some statistics. */
     getInfo()->add (1, "stats");
     getInfo()->add (2, "traversal",         "%s", getInput()->getStr(STR_TRAVERSAL_KIND).c_str());
+    getInfo()->add (2, "nb_solid_kmers",         "%d", graph._nbSolidKmers);
     getInfo()->add (2, "nb_contigs",         "%d", nbContigs);
     getInfo()->add (2, "nb_small_contigs_discarded","%d", nbSmallContigs);
     getInfo()->add (2, "nt_assembled",      "%ld", totalNt);



View it on GitLab: https://salsa.debian.org/med-team/minia/-/compare/7570801dba93b28b091264056f8a6c84e259519f...82ffc645face3f630075fb00d3b7dee8ffd2b825

-- 
View it on GitLab: https://salsa.debian.org/med-team/minia/-/compare/7570801dba93b28b091264056f8a6c84e259519f...82ffc645face3f630075fb00d3b7dee8ffd2b825
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