[med-svn] [Git][med-team/snakemake][master] 4 commits: New upstream version 5.22.1

[Rebecca N. Palmer]

Rebecca N. Palmer pushed to branch master at Debian Med / snakemake


Commits:
ede461d5 by Rebecca N. Palmer at 2020-08-16T13:19:27+01:00
New upstream version 5.22.1
- - - - -
d9372866 by Rebecca N. Palmer at 2020-08-16T13:19:53+01:00
Update upstream source from tag 'upstream/5.22.1'

Update to upstream version '5.22.1'
with Debian dir bb623425bbee01450efa2925d4a03b182bcf8034
- - - - -
f4990ed4 by Rebecca N. Palmer at 2020-08-16T13:58:43+01:00
Refresh patches.

- - - - -
4b95c632 by Rebecca N. Palmer at 2020-08-16T14:04:50+01:00
Update Lintian overrides.

- - - - -


30 changed files:

- .github/workflows/main.yml
- CHANGELOG.rst
- + CODE_OF_CONDUCT.md
- Dockerfile
- README.md
- debian/changelog
- debian/patches/local_javascript.patch
- debian/snakemake.lintian-overrides
- debian/source/lintian-overrides
- docs/_static/theme.css
- docs/conf.py
- docs/executing/cloud.rst
- + docs/executor_tutorial/azure_aks.rst
- docs/executor_tutorial/google_lifesciences.rst
- docs/executor_tutorial/tutorial.rst
- docs/index.rst
- docs/project_info/authors.rst
- docs/snakefiles/deployment.rst
- docs/snakefiles/remote_files.rst
- docs/snakefiles/reporting.rst
- setup.py
- snakemake/__init__.py
- snakemake/_version.py
- snakemake/executors/__init__.py
- snakemake/executors/google_lifesciences.py
- snakemake/remote/AzureStorage.py → snakemake/remote/AzBlob.py
- snakemake/remote/GS.py
- snakemake/resources.py
- test-environment.yml
- tests/common.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/7c0d3cf056b9c083164bb948a9efd0ee32230026...4b95c63220e2d1360913804c11116ddd7a1a7fa6

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/7c0d3cf056b9c083164bb948a9efd0ee32230026...4b95c63220e2d1360913804c11116ddd7a1a7fa6
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