Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
81b8104e by Andreas Tille at 2020-08-31T13:49:54+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,26 +1,26 @@
-Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
+Last-Update: Mon, 31 Aug 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 162 | {imaging,covid-19} |
- orthanc | 90 | {practice,covid-19,imaging} |
+ dcmtk | 163 | {imaging,covid-19} |
+ orthanc | 92 | {practice,covid-19,imaging} |
orthanc-wsi | 47 | {his,laboratory,covid-19,imaging,practice,oncology} |
gdcm | 35 | {imaging-dev} |
- dicom3tools | 26 | {imaging} |
- htsjdk | 24 | {bio-dev} |
+ dicom3tools | 25 | {imaging} |
dicomscope | 23 | {imaging} |
+ htsjdk | 22 | {bio-dev} |
gnumed-server | 20 | {covid-19,practice} |
gdcm | 15 | {covid-19,imaging} |
- ngs-sdk | 14 | {bio-dev} |
- insighttoolkit4 | 13 | {imaging-dev} |
+ ngs-sdk | 13 | {bio-dev} |
gdcm | 12 | {imaging-dev} |
+ invesalius | 12 | {imaging} |
dcm2niix | 11 | {imaging} |
- invesalius | 11 | {imaging} |
+ insighttoolkit4 | 11 | {imaging-dev} |
adun.app | 10 | {bio} |
minc-tools | 10 | {imaging} |
- nifticlib | 10 | {imaging-dev} |
openslide | 10 | {imaging} |
ngs-sdk | 9 | {bio-dev} |
+ nifticlib | 9 | {imaging-dev} |
plastimatch | 9 | {imaging} |
fastlink | 8 | {bio,cloud} |
librg-utils-perl | 8 | {bio} |
@@ -28,7 +28,6 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
nifticlib | 8 | {imaging} |
pixelmed | 8 | {imaging} |
treeview | 8 | {bio,bio-phylogeny} |
- libminc | 7 | {imaging-dev} |
obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
biojava-live | 6 | {bio-dev} |
@@ -38,6 +37,7 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
jebl2 | 6 | {bio-dev} |
king | 6 | {typesetting,imaging} |
libdivsufsort | 6 | {bio-dev} |
+ libminc | 6 | {imaging-dev} |
multiqc | 6 | {bio,covid-19} |
pymia | 6 | {imaging-dev} |
sibsim4 | 6 | {bio,cloud} |
@@ -55,6 +55,7 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
predictprotein | 5 | {bio} |
rdp-alignment | 5 | {bio} |
rdp-classifier | 5 | {bio} |
+ salmon | 5 | {covid-19,bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
anfo | 4 | {cloud,bio} |
busco | 4 | {bio,covid-19} |
@@ -71,7 +72,6 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
proalign | 4 | {bio,bio-phylogeny} |
relion | 4 | {bio} |
saint | 4 | {bio} |
- salmon | 4 | {covid-19,bio} |
stacks | 4 | {bio} |
staden | 4 | {bio} |
zalign | 4 | {cloud,bio} |
@@ -82,6 +82,7 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
biomaj3-cli | 3 | {cloud} |
brig | 3 | {bio} |
dindel | 3 | {bio} |
+ elastix | 3 | {imaging} |
fastml | 3 | {bio} |
fsm-lite | 3 | {bio} |
gatb-core | 3 | {bio} |
@@ -115,7 +116,6 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
clonalorigin | 2 | {bio} |
cufflinks | 2 | {bio,cloud} |
delly | 2 | {covid-19,bio} |
- elastix | 2 | {imaging} |
estscan | 2 | {bio} |
getdata | 2 | {bio} |
ghmm | 2 | {bio} |
@@ -132,6 +132,7 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
qcumber | 2 | {bio} |
quorum | 2 | {bio} |
rambo-k | 2 | {bio} |
+ relion | 2 | {bio} |
runcircos-gui | 2 | {bio} |
samblaster | 2 | {covid-19,bio} |
segemehl | 2 | {bio} |
@@ -150,15 +151,14 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
embassy-phylip | 1 | {cloud,bio} |
emboss-explorer | 1 | {bio} |
gatb-core | 1 | {bio-dev} |
+ htscodecs | 1 | {covid-19,bio-dev} |
intake | 1 | {bio-dev,bio} |
libsbml | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
- papyrus | 1 | {imaging-dev} |
plasmidseeker | 1 | {bio} |
q2templates | 1 | {bio} |
- relion | 1 | {bio} |
samtools-legacy | 1 | {bio-dev} |
seqan | 1 | {bio-dev} |
sift | 1 | {bio} |
@@ -179,7 +179,6 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
ctn | 0 | {imaging-dev} |
emmax | 0 | {bio} |
fis-gtm | 0 | {his} |
- htscodecs | 0 | {covid-19,bio-dev} |
kma | 0 | {bio} |
kmerresistance | 0 | {bio} |
libbigwig | 0 | {bio-dev} |
@@ -222,6 +221,7 @@ Last-Update: Mon, 31 Aug 2020 01:42:04 +0000
nifticlib | 0 | {imaging-dev} |
opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
+ papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/81b8104ebf3e8a0d4783b86707324022c437ad80
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/81b8104ebf3e8a0d4783b86707324022c437ad80
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200831/058f22e6/attachment-0001.html>