Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
14c45366 by Andreas Tille at 2020-12-01T13:45:31+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,85 +1,91 @@
-Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
+Last-Update: Tue, 01 Dec 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 183 | {imaging,covid-19} |
- orthanc | 98 | {covid-19,imaging,practice} |
- orthanc-wsi | 48 | {his,oncology,imaging,laboratory,covid-19,practice} |
+ dcmtk | 184 | {imaging,covid-19} |
+ orthanc | 99 | {covid-19,imaging,practice} |
+ orthanc-wsi | 49 | {his,oncology,imaging,laboratory,covid-19,practice} |
gdcm | 37 | {imaging-dev} |
- htsjdk | 30 | {bio-dev} |
+ htsjdk | 29 | {bio-dev} |
dcm2niix | 21 | {imaging} |
dicom3tools | 21 | {imaging} |
gdcm | 21 | {covid-19,imaging} |
- dicomscope | 19 | {imaging} |
+ dicomscope | 20 | {imaging} |
gnumed-server | 18 | {covid-19,practice} |
ngs-sdk | 18 | {bio-dev} |
adun.app | 15 | {bio} |
- invesalius | 14 | {imaging} |
minc-tools | 14 | {imaging} |
nifticlib | 14 | {imaging} |
- gdcm | 13 | {imaging-dev} |
- ngs-sdk | 11 | {bio-dev} |
+ invesalius | 13 | {imaging} |
+ gdcm | 12 | {imaging-dev} |
+ ngs-sdk | 12 | {bio-dev} |
nifticlib | 11 | {imaging-dev} |
+ pixelmed | 11 | {imaging} |
plastimatch | 11 | {imaging} |
+ king | 10 | {imaging,typesetting} |
+ ngs-sdk | 10 | {bio-dev} |
openslide | 10 | {imaging} |
- pixelmed | 10 | {imaging} |
biosig | 9 | {imaging,physics} |
- king | 9 | {imaging,typesetting} |
+ orthanc-webviewer | 9 | {imaging} |
vtk-dicom | 9 | {imaging} |
librg-utils-perl | 8 | {bio} |
- orthanc-webviewer | 8 | {imaging} |
+ melting | 8 | {cloud,bio} |
biojava-live | 7 | {bio-dev} |
ea-utils | 7 | {bio} |
+ fastlink | 7 | {bio,cloud} |
insighttoolkit4 | 7 | {imaging-dev} |
jebl2 | 7 | {bio-dev} |
- melting | 7 | {cloud,bio} |
- multiqc | 7 | {bio,covid-19} |
+ seqsero | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
+ bamkit | 6 | {bio,covid-19} |
bart-view | 6 | {imaging} |
- pymia | 6 | {imaging-dev} |
- seqsero | 6 | {bio} |
+ multiqc | 6 | {bio,covid-19} |
+ orthanc-dicomweb | 6 | {covid-19,imaging} |
+ rambo-k | 6 | {bio} |
+ arden | 5 | {cloud,bio} |
dicompyler | 5 | {oncology} |
- fastlink | 5 | {bio,cloud} |
getdata | 5 | {bio} |
libdivsufsort | 5 | {bio-dev} |
libpal-java | 5 | {bio-dev} |
mipe | 5 | {bio,cloud} |
mrs | 5 | {bio} |
obitools | 5 | {bio} |
- orthanc-dicomweb | 5 | {covid-19,imaging} |
+ orthanc-mysql | 5 | {imaging} |
+ orthanc-postgresql | 5 | {imaging} |
paraclu | 5 | {bio,cloud} |
- rambo-k | 5 | {bio} |
+ pymia | 5 | {imaging-dev} |
salmon | 5 | {covid-19,bio} |
spread-phy | 5 | {bio,bio-phylogeny} |
stacks | 5 | {bio} |
staden | 5 | {bio} |
anfo | 4 | {bio,cloud} |
- arden | 4 | {cloud,bio} |
- bamkit | 4 | {bio,covid-19} |
beast-mcmc | 4 | {bio-phylogeny,bio} |
biomaj3-cli | 4 | {cloud} |
bio-tradis | 4 | {bio-dev,bio} |
+ ecopcr | 4 | {bio} |
elastix | 4 | {imaging} |
embassy-domainatrix | 4 | {cloud,bio} |
embassy-domalign | 4 | {bio,cloud} |
- emboss-explorer | 4 | {bio} |
+ ipig | 4 | {bio} |
jmodeltest | 4 | {bio,bio-phylogeny} |
libminc | 4 | {imaging-dev} |
libncl | 4 | {bio} |
+ librdp-taxonomy-tree-java | 4 | {bio-dev} |
libsbml | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
- orthanc-mysql | 4 | {imaging} |
- orthanc-postgresql | 4 | {imaging} |
phybin | 4 | {bio} |
phyutility | 4 | {bio,cloud} |
piler | 4 | {bio} |
placnet | 4 | {bio} |
predictprotein | 4 | {bio} |
prottest | 4 | {bio-phylogeny,bio} |
+ rdp-alignment | 4 | {bio} |
+ rdp-classifier | 4 | {bio} |
saint | 4 | {bio} |
sibsim4 | 4 | {cloud,bio} |
spaced | 4 | {bio} |
tracetuner | 4 | {bio} |
+ zalign | 4 | {bio,cloud} |
assemblytics | 3 | {bio} |
biomaj3-daemon | 3 | {bio} |
bitseq | 3 | {bio} |
@@ -87,15 +93,12 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
clonalframeml | 3 | {covid-19,bio} |
clonalorigin | 3 | {bio} |
dindel | 3 | {bio} |
- ecopcr | 3 | {bio} |
embassy-domsearch | 3 | {bio,cloud} |
fastml | 3 | {bio} |
fsm-lite | 3 | {bio} |
ghmm | 3 | {bio} |
- ipig | 3 | {bio} |
lagan | 3 | {bio} |
lamarc | 3 | {bio} |
- librdp-taxonomy-tree-java | 3 | {bio-dev} |
logol | 3 | {bio} |
mauve-aligner | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
@@ -106,8 +109,6 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
prime-phylo | 3 | {bio,cloud} |
proalign | 3 | {bio-phylogeny,bio} |
quorum | 3 | {bio} |
- rdp-alignment | 3 | {bio} |
- rdp-classifier | 3 | {bio} |
rtax | 3 | {bio,cloud} |
runcircos-gui | 3 | {bio} |
scrm | 3 | {bio} |
@@ -116,11 +117,11 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
sprai | 3 | {bio} |
suitename | 3 | {bio} |
surankco | 3 | {bio} |
- zalign | 3 | {bio,cloud} |
biosig | 2 | {physics,imaging-dev} |
blasr | 2 | {bio,bio-ngs} |
busco | 2 | {covid-19,bio} |
canu | 2 | {bio} |
+ emboss-explorer | 2 | {bio} |
estscan | 2 | {bio} |
hinge | 2 | {bio} |
jellyfish1 | 2 | {bio} |
@@ -137,7 +138,6 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
soapsnp | 2 | {bio} |
yaha | 2 | {bio} |
acedb | 1 | {bio,cloud} |
- atropos | 1 | {bio} |
bambamc | 1 | {bio-dev} |
bbmap | 1 | {covid-19,bio} |
biosig | 1 | {physics,imaging-dev} |
@@ -146,8 +146,8 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
ctn | 1 | {imaging-dev} |
delly | 1 | {bio,covid-19} |
emmax | 1 | {bio} |
- gatb-core | 1 | {bio-dev} |
gatb-core | 1 | {bio} |
+ gatb-core | 1 | {bio-dev} |
htscodecs | 1 | {bio-dev,covid-19} |
intake | 1 | {bio,bio-dev} |
libbpp-core | 1 | {bio-dev} |
@@ -186,8 +186,8 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
thesias | 1 | {covid-19,bio} |
trace2dbest | 1 | {bio} |
tvc | 1 | {bio} |
- vienna-rna | 1 | {bio,covid-19} |
yanagiba | 1 | {covid-19,bio} |
+ atropos | 0 | {bio} |
biojava4-live | 0 | {bio-dev} |
biosig | 0 | {physics} |
biosyntax | 0 | {bio} |
@@ -233,10 +233,11 @@ Last-Update: Tue, 01 Dec 2020 01:42:04 +0000
tophat-recondition | 0 | {covid-19,bio} |
varna | 0 | {bio} |
varscan | 0 | {covid-19,bio} |
+ vienna-rna | 0 | {bio,covid-19} |
vtk-dicom | 0 | {imaging-dev} |
mssstest | -1 | {tools} |
orthanc-python | -1 | {covid-19} |
sight | -1 | {imaging-dev} |
svim | -1 | {bio} |
-(266 rows)
+(267 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/14c4536648c4b8428f71d1cc0cf55e90046ecc47
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/14c4536648c4b8428f71d1cc0cf55e90046ecc47
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20201201/0ef3b184/attachment-0001.html>