[med-svn] [Git][med-team/pirs][master] 7 commits: routine-update: Standards-Version: 4.5.1

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / pirs


Commits:
1b69e5e0 by Andreas Tille at 2020-12-05T12:01:05+01:00
routine-update: Standards-Version: 4.5.1

- - - - -
42487da6 by Andreas Tille at 2020-12-05T12:01:05+01:00
routine-update: debhelper-compat 13

- - - - -
9373732d by Andreas Tille at 2020-12-05T12:01:13+01:00
routine-update: Add salsa-ci file

- - - - -
a77a9825 by Andreas Tille at 2020-12-05T12:01:14+01:00
routine-update: Rules-Requires-Root: no

- - - - -
ee9a4f7d by Andreas Tille at 2020-12-05T12:01:20+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
ccdd6b82 by Andreas Tille at 2020-12-05T12:01:21+01:00
Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP.

Changes-By: lintian-brush
Fixes: lintian: uses-deprecated-adttmp
See-also: https://lintian.debian.org/tags/uses-deprecated-adttmp.html

- - - - -
f0503002 by Andreas Tille at 2020-12-05T12:09:29+01:00
routine-update: Ready to upload to unstable

- - - - -


7 changed files:

- debian/changelog
- − debian/compat
- debian/control
- + debian/salsa-ci.yml
- debian/tests/gcContCvgBias-test
- debian/tests/pirs-test
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,15 @@
+pirs (2.0.2+dfsg-9) unstable; urgency=medium
+
+  * Standards-Version: 4.5.1 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
+    Repository-Browse.
+  * Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP.
+
+ -- Andreas Tille <tille at debian.org>  Sat, 05 Dec 2020 12:01:22 +0100
+
 pirs (2.0.2+dfsg-8) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -3,14 +3,15 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
                libboost-dev,
                zlib1g-dev,
                libgzstream-dev
-Standards-Version: 4.2.1
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/pirs
 Vcs-Git: https://salsa.debian.org/med-team/pirs.git
 Homepage: https://github.com/galaxy001/pirs
+Rules-Requires-Root: no
 
 Package: pirs
 Architecture: any


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/tests/gcContCvgBias-test
=====================================
@@ -3,12 +3,12 @@
 pkg=pirs
 testbin=gcContCvgBias
 
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=$(mktemp -d /tmp/${pkg}-${testbin}-test.XXXXXX)
-  # trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-${testbin}-test.XXXXXX)
+  # trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
 fi
 
-cd $ADTTMP
+cd $AUTOPKGTEST_TMP
 
 cp -a /usr/share/doc/${pkg}/examples/${testbin}/* .
 # find . -type f -name "*.gz" -exec gunzip \{\} \;


=====================================
debian/tests/pirs-test
=====================================
@@ -3,12 +3,12 @@
 pkg=pirs
 testbin=pirs
 
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=$(mktemp -d /tmp/${pkg}-${testbin}-test.XXXXXX)
-  # trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-${testbin}-test.XXXXXX)
+  # trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
 fi
 
-cd $ADTTMP
+cd $AUTOPKGTEST_TMP
 
 cp -a /usr/share/doc/${pkg}/examples/${testbin}/* .
 find . -type f -name "*.gz" -exec gunzip \{\} \;


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/galaxy001/pirs/issues
+Bug-Submit: https://github.com/galaxy001/pirs/issues/new
 Reference:
  Author: >
   Xuesong Hu and Jianying Yuan and Yujian Shi and Jianliang Lu and
@@ -23,3 +25,5 @@ Registry:
    Entry: NA
  - Name: conda:bioconda
    Entry: pirs
+Repository: https://github.com/galaxy001/pirs.git
+Repository-Browse: https://github.com/galaxy001/pirs



View it on GitLab: https://salsa.debian.org/med-team/pirs/-/compare/c9eebf729d2f546e6fdcca2a72a8a4bc319dd63d...f0503002be355f5cfde1faabd0de51393778246b

-- 
View it on GitLab: https://salsa.debian.org/med-team/pirs/-/compare/c9eebf729d2f546e6fdcca2a72a8a4bc319dd63d...f0503002be355f5cfde1faabd0de51393778246b
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