Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
0321c896 by Andreas Tille at 2020-12-05T13:45:36+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,93 +1,87 @@
-Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
+Last-Update: Sat, 05 Dec 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 182 | {imaging,covid-19} |
- orthanc | 96 | {imaging,covid-19,practice} |
- orthanc-wsi | 47 | {imaging,practice,his,covid-19,laboratory,oncology} |
+ dcmtk | 183 | {imaging,covid-19} |
+ orthanc | 97 | {imaging,covid-19,practice} |
+ orthanc-wsi | 49 | {imaging,practice,his,covid-19,laboratory,oncology} |
gdcm | 36 | {imaging-dev} |
- htsjdk | 30 | {bio-dev} |
- dicom3tools | 23 | {imaging} |
- dicomscope | 21 | {imaging} |
+ htsjdk | 29 | {bio-dev} |
+ dicom3tools | 22 | {imaging} |
gdcm | 21 | {covid-19,imaging} |
dcm2niix | 20 | {imaging} |
- ngs-sdk | 18 | {bio-dev} |
+ dicomscope | 20 | {imaging} |
+ ngs-sdk | 17 | {bio-dev} |
adun.app | 16 | {bio} |
gnumed-server | 16 | {covid-19,practice} |
nifticlib | 15 | {imaging} |
gdcm | 13 | {imaging-dev} |
invesalius | 13 | {imaging} |
minc-tools | 13 | {imaging} |
- ngs-sdk | 11 | {bio-dev} |
nifticlib | 11 | {imaging-dev} |
- openslide | 11 | {imaging} |
ngs-sdk | 10 | {bio-dev} |
+ openslide | 10 | {imaging} |
pixelmed | 10 | {imaging} |
- biosig | 9 | {physics,imaging} |
- librg-utils-perl | 9 | {bio} |
- melting | 9 | {bio,cloud} |
+ orthanc-webviewer | 9 | {imaging} |
plastimatch | 9 | {imaging} |
+ biosig | 8 | {physics,imaging} |
ea-utils | 8 | {bio} |
insighttoolkit4 | 8 | {imaging-dev} |
king | 8 | {imaging,typesetting} |
- orthanc-webviewer | 8 | {imaging} |
+ librg-utils-perl | 8 | {bio} |
+ melting | 8 | {bio,cloud} |
seqsero | 8 | {bio} |
vtk-dicom | 8 | {imaging} |
bamkit | 7 | {bio,covid-19} |
- fastlink | 7 | {cloud,bio} |
jebl2 | 7 | {bio-dev} |
+ orthanc-dicomweb | 7 | {covid-19,imaging} |
rambo-k | 7 | {bio} |
salmon | 7 | {bio,covid-19} |
- staden | 7 | {bio} |
treeview | 7 | {bio,bio-phylogeny} |
- arden | 6 | {cloud,bio} |
bart-view | 6 | {imaging} |
biojava-live | 6 | {bio-dev} |
- dicompyler | 6 | {oncology} |
- mipe | 6 | {cloud,bio} |
- orthanc-dicomweb | 6 | {covid-19,imaging} |
- paraclu | 6 | {bio,cloud} |
+ fastlink | 6 | {cloud,bio} |
+ orthanc-mysql | 6 | {imaging} |
+ orthanc-postgresql | 6 | {imaging} |
pymia | 6 | {imaging-dev} |
- anfo | 5 | {cloud,bio} |
- elastix | 5 | {imaging} |
- embassy-domainatrix | 5 | {bio,cloud} |
- embassy-domalign | 5 | {bio,cloud} |
+ staden | 6 | {bio} |
+ arden | 5 | {cloud,bio} |
+ dicompyler | 5 | {oncology} |
getdata | 5 | {bio} |
- ipig | 5 | {bio} |
libdivsufsort | 5 | {bio-dev} |
libncl | 5 | {bio} |
libpal-java | 5 | {bio-dev} |
+ mipe | 5 | {cloud,bio} |
multiqc | 5 | {bio,covid-19} |
obitools | 5 | {bio} |
- orthanc-mysql | 5 | {imaging} |
- orthanc-postgresql | 5 | {imaging} |
- phyutility | 5 | {bio,cloud} |
- saint | 5 | {bio} |
- sibsim4 | 5 | {bio,cloud} |
+ paraclu | 5 | {bio,cloud} |
spread-phy | 5 | {bio-phylogeny,bio} |
stacks | 5 | {bio} |
- zalign | 5 | {cloud,bio} |
+ anfo | 4 | {cloud,bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
bio-tradis | 4 | {bio-dev,bio} |
ecopcr | 4 | {bio} |
- embassy-domsearch | 4 | {bio,cloud} |
+ elastix | 4 | {imaging} |
+ embassy-domainatrix | 4 | {bio,cloud} |
+ embassy-domalign | 4 | {bio,cloud} |
+ ipig | 4 | {bio} |
jmodeltest | 4 | {bio,bio-phylogeny} |
libminc | 4 | {imaging-dev} |
librdp-taxonomy-tree-java | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
mrs | 4 | {bio} |
- perm | 4 | {bio,cloud} |
phybin | 4 | {bio} |
+ phyutility | 4 | {bio,cloud} |
piler | 4 | {bio} |
placnet | 4 | {bio} |
- prime-phylo | 4 | {cloud,bio} |
- proalign | 4 | {bio,bio-phylogeny} |
prottest | 4 | {bio,bio-phylogeny} |
rdp-alignment | 4 | {bio} |
rdp-classifier | 4 | {bio} |
- rtax | 4 | {bio,cloud} |
+ saint | 4 | {bio} |
+ sibsim4 | 4 | {bio,cloud} |
spaced | 4 | {bio} |
tracetuner | 4 | {bio} |
+ zalign | 4 | {cloud,bio} |
assemblytics | 3 | {bio} |
biomaj3-cli | 3 | {cloud} |
bitseq | 3 | {bio} |
@@ -96,6 +90,7 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
clonalframeml | 3 | {bio,covid-19} |
clonalorigin | 3 | {bio} |
dindel | 3 | {bio} |
+ embassy-domsearch | 3 | {bio,cloud} |
fastml | 3 | {bio} |
fsm-lite | 3 | {bio} |
ghmm | 3 | {bio} |
@@ -107,15 +102,18 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
mhap | 3 | {bio,bio-ngs} |
microbegps | 3 | {bio} |
pbdagcon | 3 | {bio} |
+ perm | 3 | {bio,cloud} |
phast | 3 | {bio} |
+ prime-phylo | 3 | {cloud,bio} |
+ proalign | 3 | {bio,bio-phylogeny} |
quorum | 3 | {bio} |
+ rtax | 3 | {bio,cloud} |
runcircos-gui | 3 | {bio} |
sga | 3 | {bio} |
sight | 3 | {imaging} |
sprai | 3 | {bio} |
suitename | 3 | {bio} |
surankco | 3 | {bio} |
- acedb | 2 | {bio,cloud} |
biomaj3-daemon | 2 | {bio} |
biosig | 2 | {imaging-dev,physics} |
blasr | 2 | {bio,bio-ngs} |
@@ -136,6 +134,7 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
soapaligner | 2 | {bio} |
soapsnp | 2 | {bio} |
yaha | 2 | {bio} |
+ acedb | 1 | {bio,cloud} |
bambamc | 1 | {bio-dev} |
bbmap | 1 | {covid-19,bio} |
biosig | 1 | {physics,imaging-dev} |
@@ -143,8 +142,8 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
cat-bat | 1 | {bio,covid-19} |
ctn | 1 | {imaging-dev} |
delly | 1 | {covid-19,bio} |
- gatb-core | 1 | {bio} |
gatb-core | 1 | {bio-dev} |
+ gatb-core | 1 | {bio} |
htscodecs | 1 | {bio-dev,covid-19} |
intake | 1 | {bio-dev,bio} |
libbpp-core | 1 | {bio-dev} |
@@ -169,7 +168,6 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
- papyrus | 1 | {imaging-dev} |
pbseqlib | 1 | {bio-dev} |
plasmidid | 1 | {covid-19,bio} |
plasmidseeker | 1 | {bio} |
@@ -208,6 +206,7 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
nanosv | 0 | {covid-19,bio} |
nifticlib | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
+ papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
@@ -215,8 +214,8 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
pilercr | 0 | {bio} |
pique | 0 | {bio} |
pplacer | 0 | {covid-19,bio,bio-phylogeny} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
q2templates | 0 | {bio,bio-dev} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
@@ -237,5 +236,5 @@ Last-Update: Sat, 05 Dec 2020 01:42:03 +0000
orthanc-python | -1 | {covid-19} |
sight | -1 | {imaging-dev} |
svim | -1 | {bio} |
-(265 rows)
+(264 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0321c8968c26c9d820ffdd08c6660673fe8cf5ca
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0321c8968c26c9d820ffdd08c6660673fe8cf5ca
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20201205/6805f47d/attachment-0001.html>