[med-svn] [Git][med-team/glam2][master] 13 commits: routine-update: Standards-Version: 4.5.1

Mon Dec 7 21:41:14 GMT 2020


Andreas Tille pushed to branch master at Debian Med / glam2


Commits:
ea6372a2 by Andreas Tille at 2020-12-07T21:08:55+01:00
routine-update: Standards-Version: 4.5.1

- - - - -
51d1c218 by Andreas Tille at 2020-12-07T21:08:55+01:00
routine-update: debhelper-compat 13

- - - - -
1feffcc2 by Andreas Tille at 2020-12-07T21:08:59+01:00
routine-update: Secure URI in copyright format

- - - - -
353c9a37 by Andreas Tille at 2020-12-07T21:08:59+01:00
routine-update: Remove trailing whitespace in debian/changelog

- - - - -
d4fc9c37 by Andreas Tille at 2020-12-07T21:08:59+01:00
routine-update: rename debian/NEWS.Debian debian/NEWS

- - - - -
83d1c0c1 by Andreas Tille at 2020-12-07T21:09:00+01:00
routine-update: Add salsa-ci file

- - - - -
bb332070 by Andreas Tille at 2020-12-07T21:09:00+01:00
routine-update: Rules-Requires-Root: no

- - - - -
3a04b824 by Andreas Tille at 2020-12-07T21:09:01+01:00
Trim trailing whitespace.

Changes-By: lintian-brush
Fixes: lintian: trailing-whitespace
See-also: https://lintian.debian.org/tags/trailing-whitespace.html

- - - - -
bf0524d9 by Andreas Tille at 2020-12-07T21:09:07+01:00
Set field Upstream-Name in debian/copyright.

Changes-By: lintian-brush

- - - - -
3bdb3ba4 by Andreas Tille at 2020-12-07T21:09:15+01:00
Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright).

Changes-By: lintian-brush

- - - - -
6daf4d35 by Andreas Tille at 2020-12-07T22:05:17+01:00
Restore original index

- - - - -
3c00cab8 by Andreas Tille at 2020-12-07T22:07:35+01:00
Fix html syntax

- - - - -
d13dad53 by Andreas Tille at 2020-12-07T22:09:21+01:00
Upload to unstable

- - - - -


10 changed files:

- debian/NEWS.Debian → debian/NEWS
- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/patches/fix_html_syntax.patch
- debian/patches/series
- + debian/salsa-ci.yml
- debian/upstream/metadata
- doc/index.html


Changes:

=====================================
debian/NEWS.Debian → debian/NEWS
=====================================


=====================================
debian/changelog
=====================================
@@ -1,3 +1,19 @@
+glam2 (1064-9) unstable; urgency=medium
+
+  * Standards-Version: 4.5.1 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Secure URI in copyright format (routine-update)
+  * Remove trailing whitespace in debian/changelog (routine-update)
+  * rename debian/NEWS.Debian debian/NEWS (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * Trim trailing whitespace.
+  * Set field Upstream-Name in debian/copyright.
+  * Remove obsolete field Name from debian/upstream/metadata (already present in
+    machine-readable debian/copyright).
+
+ -- Andreas Tille <tille at debian.org>  Mon, 07 Dec 2020 22:07:41 +0100
+
 glam2 (1064-8) unstable; urgency=medium
 
   * Team upload.
@@ -86,7 +102,7 @@ glam2 (1064-3) unstable; urgency=low
 glam2 (1064-2) unstable; urgency=low
 
   * debian/control, debian/reference: simplified long description and moved
-    bibliographic references to a new file. 
+    bibliographic references to a new file.
 
  -- Charles Plessy <plessy at debian.org>  Tue, 21 Apr 2009 21:49:54 +0900
 
@@ -117,4 +133,3 @@ glam2 (1056-1) unstable; urgency=low
   * Initial release (Closes: #45237)
 
  -- Steffen Moeller <moeller at debian.org>  Tue, 13 Nov 2007 00:35:50 +0100
-


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -5,12 +5,13 @@ Uploaders: Steffen Moeller <moeller at debian.org>,
            Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
                libfftw3-dev
-Standards-Version: 4.3.0
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/glam2
 Vcs-Git: https://salsa.debian.org/med-team/glam2.git
 Homepage: http://acb.qfab.org/acb/glam2/
+Rules-Requires-Root: no
 
 Package: glam2
 Architecture: any


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Contact: Martin C Frith <martin at cbrc.jp>
                   Timothy L Bailey <t.bailey at imb.uq.edu.au>
 Source: http://bioinformatics.org.au/glam2/archive/glam2-1064.zip
@@ -6,6 +6,7 @@ Source: http://bioinformatics.org.au/glam2/archive/glam2-1064.zip
         maintained separately at this place any more.  Since MEME is non-free
         we are keeping this old version of glam2 in Debian.  Se also
           https://lists.debian.org/debian-med/2013/11/msg00034.html
+Upstream-Name: GLAM2
 
 Files: *
 Copyright: 2007 Martin C Frith <martin at cbrc.jp>


=====================================
debian/patches/fix_html_syntax.patch
=====================================
@@ -0,0 +1,15 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Mon, 07 Dec 2020 21:09:16 +0100
+Description: Fix html syntax
+
+--- a/doc/index.html
++++ b/doc/index.html
+@@ -25,7 +25,7 @@ deletions, A-GLAM is probably better.  '
+ Gapless Local Alignment of Multiple sequences, but it now stands for
+ Gapped Local Alignment of Motifs.</p>
+ 
+-<p<strong>Inventory:</strong> The package includes these programs:</p>
++<p><strong>Inventory:</strong> The package includes these programs:</p>
+ 
+ <ul>
+ 


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
 hardening.patch
 change-fixed-compilers.patch
+fix_html_syntax.patch


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/upstream/metadata
=====================================
@@ -1,7 +1,6 @@
 Contact: >
  Martin C Frith <martin at cbrc.jp> and
  Timothy L Bailey <t.bailey at imb.uq.edu.au>
-Name: GLAM2
 Reference:
  - Author: >
     Martin C. Frith AND Neil F. W. Saunders AND Bostjan Kobe AND


=====================================
doc/index.html
=====================================
@@ -25,7 +25,7 @@ deletions, A-GLAM is probably better.  'GLAM' used to stand for
 Gapless Local Alignment of Multiple sequences, but it now stands for
 Gapped Local Alignment of Motifs.</p>
 
-<p><strong>Inventory:</strong> The package includes these programs:</p>
+<p<strong>Inventory:</strong> The package includes these programs:</p>
 
 <ul>
 



View it on GitLab: https://salsa.debian.org/med-team/glam2/-/compare/413d2c45cdea1155288be04aeb8eec501ce0fd8b...d13dad536e5b9512e90eb720815adff4636b7074

-- 
View it on GitLab: https://salsa.debian.org/med-team/glam2/-/compare/413d2c45cdea1155288be04aeb8eec501ce0fd8b...d13dad536e5b9512e90eb720815adff4636b7074
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