[med-svn] [Git][med-team/q2-fragment-insertion][master] 2 commits: Refinement of d/control

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / q2-fragment-insertion


Commits:
93e76b75 by Steffen Möller at 2020-12-12T15:04:38+01:00
Refinement of d/control

- - - - -
3ebeb983 by Steffen Möller at 2020-12-13T00:36:37+01:00
runtime test will fail also with run-sepp.sh in place

- - - - -


5 changed files:

- debian/changelog
- debian/control
- + debian/patches/python2to3.patch
- + debian/patches/series
- debian/tests/control


Changes:

=====================================
debian/changelog
=====================================
@@ -1,4 +1,4 @@
-q2-fragment-insertion (2020.11.1-1) unstable; urgency=medium
+q2-fragment-insertion (2020.11.1-1) UNRELEASED; urgency=medium
 
   * Initial release (Closes: #977115)
 


=====================================
debian/control
=====================================
@@ -7,10 +7,11 @@ Build-Depends: debhelper-compat (= 13),
                dh-python,
                python3,
                python3-setuptools,
-               python3-pytest-cov,
-               python3-biom-format,
                qiime (>= 2020.11.0),
-               python3-skbio
+               python3-pytest <!nocheck>,
+               python3-pytest-cov <!nocheck>,
+               python3-biom-format <!nocheck>,
+               python3-skbio <!nocheck>
 Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/q2-fragment-insertion
 Vcs-Git: https://salsa.debian.org/med-team/q2-fragment-insertion.git
@@ -26,9 +27,9 @@ Depends: ${shlibs:Depends},
          python3-biom-format,
          python3-skbio,
          q2-types (>= 2020.11.1)
-Recommends: sepp,
+Recommends: sepp (>= 4.3.10+dfsg-4),
             python3-ijson,
-            default-jdk,
+            default-jdk
 Description: QIIME 2 plugin for fragment insertion
  QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
  package with a focus on data and analysis transparency. QIIME 2 enables


=====================================
debian/patches/python2to3.patch
=====================================
@@ -0,0 +1,17 @@
+Index: q2-fragment-insertion/Makefile
+===================================================================
+--- q2-fragment-insertion.orig/Makefile
++++ q2-fragment-insertion/Makefile
+@@ -7,10 +7,10 @@ lint:
+ 	flake8
+ 
+ test: all
+-	py.test
++	py.test-3
+ 
+ install: all
+-	python setup.py install
++	python3 setup.py install
+ 
+ dev: all
+ 	pip install -e .


=====================================
debian/patches/series
=====================================
@@ -0,0 +1 @@
+python2to3.patch


=====================================
debian/tests/control
=====================================
@@ -1,3 +1,3 @@
 Tests: run-unit-test
-Depends: @, python3-pytest-cov
+Depends: @, python3-pytest-cov, sepp (>= 4.3.10+dfsg-4)
 Restrictions: allow-stderr



View it on GitLab: https://salsa.debian.org/med-team/q2-fragment-insertion/-/compare/a6c2f0c615573d67c29a6d8645544915b0cc44c7...3ebeb98372f00eb2ed02fdff991e555b14f9d88c

-- 
View it on GitLab: https://salsa.debian.org/med-team/q2-fragment-insertion/-/compare/a6c2f0c615573d67c29a6d8645544915b0cc44c7...3ebeb98372f00eb2ed02fdff991e555b14f9d88c
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