[med-svn] [Git][med-team/bcbio][master] TL;DR for d/TODO

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / bcbio


Commits:
a48982aa by Steffen Moeller at 2020-12-13T15:24:43+01:00
TL;DR for d/TODO

- - - - -


1 changed file:

- debian/TODO


Changes:

=====================================
debian/TODO
=====================================
@@ -1,6 +1,17 @@
 TODO for bcbio with Debian
 ==========================
 
+TL;DR
+-----
+
+We yet fail to run bcbio workflows successfully. The package builds but
+tests fail. You get pretty close if installing
+ * GATK (many Java dependencies not packaged)
+ * qualimap (sources of Java dependencies no longer available)
+manually. However, for the immediate future we suggest to install
+bcbio via conda - and cordially invite to help us in bringing bcbio
+to Debian.
+
 IF YOU ARE READING THIS AND FEEL LIKE HELPING OUT - PLEASE CONTACT US
 ---------------------------------------------------------------------
 



View it on GitLab: https://salsa.debian.org/med-team/bcbio/-/commit/a48982aa7bca71129decc931487c09ef30496119

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