Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
7bf70ab1 by Andreas Tille at 2020-12-18T13:46:27+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,45 +1,44 @@
-Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
+Last-Update: Fri, 18 Dec 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 192 | {imaging,covid-19} |
- orthanc | 101 | {imaging,covid-19,practice} |
- orthanc-wsi | 55 | {covid-19,laboratory,practice,oncology,his,imaging} |
- gdcm | 43 | {imaging-dev} |
- htsjdk | 36 | {bio-dev} |
+ dcmtk | 197 | {imaging,covid-19} |
+ orthanc | 103 | {imaging,covid-19,practice} |
+ orthanc-wsi | 56 | {covid-19,laboratory,practice,oncology,his,imaging} |
+ gdcm | 44 | {imaging-dev} |
+ htsjdk | 34 | {bio-dev} |
amide | 31 | {imaging} |
dicom3tools | 24 | {imaging} |
- dcm2niix | 20 | {imaging} |
gdcm | 20 | {imaging,covid-19} |
+ dcm2niix | 19 | {imaging} |
gnumed-server | 19 | {covid-19,practice} |
dicomscope | 18 | {imaging} |
+ ngs-sdk | 18 | {bio-dev} |
odin | 18 | {imaging-dev,imaging} |
- ngs-sdk | 17 | {bio-dev} |
adun.app | 16 | {bio} |
- invesalius | 15 | {imaging} |
- nifticlib | 15 | {imaging} |
+ invesalius | 16 | {imaging} |
+ nifticlib | 16 | {imaging} |
dicomnifti | 14 | {imaging} |
+ gdcm | 14 | {imaging-dev} |
minc-tools | 14 | {imaging} |
- gdcm | 12 | {imaging-dev} |
pixelmed | 12 | {imaging} |
- melting | 11 | {bio,cloud} |
ngs-sdk | 11 | {bio-dev} |
plastimatch | 11 | {imaging} |
ea-utils | 10 | {bio} |
librg-utils-perl | 10 | {bio} |
+ melting | 10 | {bio,cloud} |
mia | 10 | {imaging} |
ngs-sdk | 10 | {bio-dev} |
openslide | 10 | {imaging} |
vtk-dicom | 10 | {imaging} |
biosig | 9 | {imaging,physics} |
fastlink | 9 | {bio,cloud} |
- insighttoolkit4 | 9 | {imaging-dev} |
jebl2 | 9 | {bio-dev} |
king | 9 | {imaging,typesetting} |
obitools | 9 | {bio} |
orthanc-webviewer | 9 | {imaging} |
bamkit | 8 | {bio,covid-19} |
- salmon | 8 | {covid-19,bio} |
+ insighttoolkit4 | 8 | {imaging-dev} |
treeview | 8 | {bio,bio-phylogeny} |
beast-mcmc | 7 | {bio,bio-phylogeny} |
biojava-live | 7 | {bio-dev} |
@@ -50,6 +49,7 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
prime-phylo | 7 | {cloud,bio} |
pymia | 7 | {imaging-dev} |
rambo-k | 7 | {bio} |
+ salmon | 7 | {covid-19,bio} |
seqsero | 7 | {bio} |
arden | 6 | {bio,cloud} |
bio-tradis | 6 | {bio,bio-dev} |
@@ -69,6 +69,7 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
zalign | 6 | {bio,cloud} |
anfo | 5 | {cloud,bio} |
ecopcr | 5 | {bio} |
+ fsm-lite | 5 | {bio} |
ghmm | 5 | {bio} |
ipig | 5 | {bio} |
jellyfish1 | 5 | {bio} |
@@ -84,7 +85,9 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
rdp-classifier | 5 | {bio} |
runcircos-gui | 5 | {bio} |
saint | 5 | {bio} |
+ spaced | 5 | {bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
+ surankco | 5 | {bio} |
assemblytics | 4 | {bio} |
bart-view | 4 | {imaging} |
bitseq | 4 | {bio} |
@@ -94,7 +97,6 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
elastix | 4 | {imaging} |
embassy-domainatrix | 4 | {bio,cloud} |
fastml | 4 | {bio} |
- fsm-lite | 4 | {bio} |
lamarc | 4 | {bio} |
libminc | 4 | {imaging-dev} |
metaphlan2 | 4 | {bio} |
@@ -106,10 +108,9 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
sga | 4 | {bio} |
sibsim4 | 4 | {cloud,bio} |
soapsnp | 4 | {bio} |
- spaced | 4 | {bio} |
sprai | 4 | {bio} |
stacks | 4 | {bio} |
- surankco | 4 | {bio} |
+ suitename | 4 | {bio} |
tracetuner | 4 | {bio} |
biomaj3-cli | 3 | {cloud} |
biomaj3-daemon | 3 | {bio} |
@@ -121,6 +122,7 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
estscan | 3 | {bio} |
getdata | 3 | {bio} |
hinge | 3 | {bio} |
+ libsbml | 3 | {bio-dev} |
logol | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
oscar | 3 | {tools,practice,data} |
@@ -128,12 +130,11 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
qcumber | 3 | {bio} |
rtax | 3 | {cloud,bio} |
soapaligner | 3 | {bio} |
- suitename | 3 | {bio} |
yaha | 3 | {bio} |
blimps | 2 | {bio} |
gatb-core | 2 | {bio} |
libctapimkt | 2 | {practice} |
- libsbml | 2 | {bio-dev} |
+ libmuscle | 2 | {bio-dev} |
plasmidseeker | 2 | {bio} |
salmid | 2 | {bio} |
samblaster | 2 | {bio,covid-19} |
@@ -143,12 +144,11 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
sight | 2 | {imaging} |
tvc | 2 | {bio} |
acedb | 1 | {cloud,bio} |
- biosig | 1 | {imaging-dev,physics} |
biosig | 1 | {physics,imaging-dev} |
+ biosig | 1 | {imaging-dev,physics} |
gifticlib | 1 | {imaging-dev} |
htscodecs | 1 | {covid-19,bio-dev} |
intake | 1 | {bio,bio-dev} |
- libmuscle | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
@@ -159,6 +159,7 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
plasmidid | 1 | {bio,covid-19} |
seqan | 1 | {bio-dev} |
simpleitk | 1 | {imaging-dev} |
+ srf | 1 | {bio-dev} |
trace2dbest | 1 | {bio} |
atropos | 0 | {bio} |
bambamc | 0 | {bio-dev} |
@@ -234,7 +235,6 @@ Last-Update: Fri, 18 Dec 2020 01:42:03 +0000
skewer | 0 | {bio} |
smrtanalysis | 0 | {bio,covid-19} |
spaln | 0 | {covid-19,bio} |
- srf | 0 | {bio-dev} |
thesias | 0 | {bio,covid-19} |
tophat-recondition | 0 | {bio,covid-19} |
varna | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7bf70ab1753c7165378078e4b3d6722744d564e0
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7bf70ab1753c7165378078e4b3d6722744d564e0
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