[med-svn] [Git][med-team/kraken][master] 8 commits: routine-update: Standards-Version: 4.5.1

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / kraken


Commits:
7912919c by Andreas Tille at 2020-12-18T16:55:35+01:00
routine-update: Standards-Version: 4.5.1

- - - - -
afc312ea by Andreas Tille at 2020-12-18T16:55:35+01:00
routine-update: debhelper-compat 13

- - - - -
dc2a03e8 by Andreas Tille at 2020-12-18T16:55:38+01:00
routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g

- - - - -
21fb8725 by Andreas Tille at 2020-12-18T16:55:38+01:00
routine-update: Add salsa-ci file

- - - - -
1a34f6d6 by Andreas Tille at 2020-12-18T16:55:39+01:00
routine-update: Rules-Requires-Root: no

- - - - -
187ff263 by Andreas Tille at 2020-12-18T16:55:54+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
b3649cbc by Andreas Tille at 2020-12-18T16:55:54+01:00
routine-update: watch file standard 4

- - - - -
48f6eea5 by Andreas Tille at 2020-12-18T16:57:22+01:00
routine-update: Ready to upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- + debian/salsa-ci.yml
- debian/tests/run-unit-test
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,16 @@
+kraken (1.1.1-2) unstable; urgency=medium
+
+  * Standards-Version: 4.5.1 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
+    Repository-Browse.
+  * watch file standard 4 (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Fri, 18 Dec 2020 16:55:55 +0100
+
 kraken (1.1.1-1) unstable; urgency=medium
 
   * New upstream version


=====================================
debian/control
=====================================
@@ -3,12 +3,13 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                jellyfish1
-Standards-Version: 4.4.0
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/kraken
 Vcs-Git: https://salsa.debian.org/med-team/kraken.git
 Homepage: http://ccb.jhu.edu/software/kraken/
+Rules-Requires-Root: no
 
 Package: kraken
 Architecture: any


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/tests/run-unit-test
=====================================
@@ -2,12 +2,12 @@
 
 pkg=kraken
 
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
-  trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
 fi
 
-cd $ADTTMP
+cd $AUTOPKGTEST_TMP
 
 cp -a /usr/share/doc/${pkg}/test_data/* .
 gunzip -r *


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/DerrickWood/kraken/issues
+Bug-Submit: https://github.com/DerrickWood/kraken/issues/new
 Reference:
   Author: Derrick E Wood and Steven L Salzberg
   Title: >
@@ -20,3 +22,5 @@ Registry:
     Entry: NA
   - Name: conda:bioconda
     Entry: kraken
+Repository: https://github.com/DerrickWood/kraken.git
+Repository-Browse: https://github.com/DerrickWood/kraken


=====================================
debian/watch
=====================================
@@ -1,4 +1,4 @@
-version=3
+version=4
 
 opts="uversionmangle=s/-beta/~beta/" \
   https://github.com/DerrickWood/kraken/releases .*/archive/v(\d[\d.beta-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)



View it on GitLab: https://salsa.debian.org/med-team/kraken/-/compare/a508d79bd85b7b7a138d09d0010d003e69c33d9d...48f6eea5870c6bc19500ddd64feb4dda63485352

-- 
View it on GitLab: https://salsa.debian.org/med-team/kraken/-/compare/a508d79bd85b7b7a138d09d0010d003e69c33d9d...48f6eea5870c6bc19500ddd64feb4dda63485352
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