Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ddf242fe by Andreas Tille at 2020-12-19T13:46:05+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,54 +1,54 @@
-Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
+Last-Update: Sat, 19 Dec 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 197 | {imaging,covid-19} |
- orthanc | 103 | {imaging,covid-19,practice} |
+ dcmtk | 200 | {imaging,covid-19} |
+ orthanc | 104 | {imaging,covid-19,practice} |
orthanc-wsi | 56 | {covid-19,laboratory,practice,oncology,his,imaging} |
- gdcm | 44 | {imaging-dev} |
+ gdcm | 46 | {imaging-dev} |
htsjdk | 34 | {bio-dev} |
- amide | 31 | {imaging} |
- dicom3tools | 24 | {imaging} |
- gdcm | 20 | {imaging,covid-19} |
- dcm2niix | 19 | {imaging} |
- gnumed-server | 19 | {covid-19,practice} |
- dicomscope | 18 | {imaging} |
+ amide | 30 | {imaging} |
+ dicom3tools | 23 | {imaging} |
+ dicomscope | 20 | {imaging} |
+ gnumed-server | 20 | {covid-19,practice} |
+ gdcm | 19 | {imaging,covid-19} |
ngs-sdk | 18 | {bio-dev} |
odin | 18 | {imaging-dev,imaging} |
- adun.app | 16 | {bio} |
- invesalius | 16 | {imaging} |
- nifticlib | 16 | {imaging} |
- dicomnifti | 14 | {imaging} |
+ invesalius | 17 | {imaging} |
+ dcm2niix | 16 | {imaging} |
+ adun.app | 14 | {bio} |
gdcm | 14 | {imaging-dev} |
- minc-tools | 14 | {imaging} |
- pixelmed | 12 | {imaging} |
+ nifticlib | 14 | {imaging} |
+ dicomnifti | 13 | {imaging} |
+ minc-tools | 13 | {imaging} |
+ mia | 12 | {imaging} |
ngs-sdk | 11 | {bio-dev} |
plastimatch | 11 | {imaging} |
ea-utils | 10 | {bio} |
+ king | 10 | {imaging,typesetting} |
librg-utils-perl | 10 | {bio} |
melting | 10 | {bio,cloud} |
- mia | 10 | {imaging} |
ngs-sdk | 10 | {bio-dev} |
openslide | 10 | {imaging} |
+ pixelmed | 10 | {imaging} |
vtk-dicom | 10 | {imaging} |
biosig | 9 | {imaging,physics} |
fastlink | 9 | {bio,cloud} |
+ insighttoolkit4 | 9 | {imaging-dev} |
jebl2 | 9 | {bio-dev} |
- king | 9 | {imaging,typesetting} |
obitools | 9 | {bio} |
orthanc-webviewer | 9 | {imaging} |
bamkit | 8 | {bio,covid-19} |
- insighttoolkit4 | 8 | {imaging-dev} |
treeview | 8 | {bio,bio-phylogeny} |
beast-mcmc | 7 | {bio,bio-phylogeny} |
biojava-live | 7 | {bio-dev} |
dicompyler | 7 | {oncology} |
libpal-java | 7 | {bio-dev} |
- nifti2dicom | 7 | {imaging} |
orthanc-dicomweb | 7 | {imaging,covid-19} |
prime-phylo | 7 | {cloud,bio} |
pymia | 7 | {imaging-dev} |
rambo-k | 7 | {bio} |
+ rdp-alignment | 7 | {bio} |
salmon | 7 | {covid-19,bio} |
seqsero | 7 | {bio} |
arden | 6 | {bio,cloud} |
@@ -64,12 +64,11 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
phyutility | 6 | {cloud,bio} |
placnet | 6 | {bio} |
prottest | 6 | {bio-phylogeny,bio} |
- rdp-alignment | 6 | {bio} |
staden | 6 | {bio} |
zalign | 6 | {bio,cloud} |
anfo | 5 | {cloud,bio} |
+ bitseq | 5 | {bio} |
ecopcr | 5 | {bio} |
- fsm-lite | 5 | {bio} |
ghmm | 5 | {bio} |
ipig | 5 | {bio} |
jellyfish1 | 5 | {bio} |
@@ -85,22 +84,21 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
rdp-classifier | 5 | {bio} |
runcircos-gui | 5 | {bio} |
saint | 5 | {bio} |
- spaced | 5 | {bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
- surankco | 5 | {bio} |
assemblytics | 4 | {bio} |
bart-view | 4 | {imaging} |
- bitseq | 4 | {bio} |
brig | 4 | {bio} |
busco | 4 | {bio,covid-19} |
clonalorigin | 4 | {bio} |
elastix | 4 | {imaging} |
embassy-domainatrix | 4 | {bio,cloud} |
fastml | 4 | {bio} |
+ fsm-lite | 4 | {bio} |
lamarc | 4 | {bio} |
libminc | 4 | {imaging-dev} |
metaphlan2 | 4 | {bio} |
microbegps | 4 | {bio} |
+ paraclu | 4 | {bio,cloud} |
perm | 4 | {cloud,bio} |
proalign | 4 | {bio-phylogeny,bio} |
pscan-chip | 4 | {bio} |
@@ -108,9 +106,10 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
sga | 4 | {bio} |
sibsim4 | 4 | {cloud,bio} |
soapsnp | 4 | {bio} |
+ spaced | 4 | {bio} |
sprai | 4 | {bio} |
stacks | 4 | {bio} |
- suitename | 4 | {bio} |
+ surankco | 4 | {bio} |
tracetuner | 4 | {bio} |
biomaj3-cli | 3 | {cloud} |
biomaj3-daemon | 3 | {bio} |
@@ -125,16 +124,16 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
libsbml | 3 | {bio-dev} |
logol | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
- oscar | 3 | {tools,practice,data} |
- paraclu | 3 | {bio,cloud} |
qcumber | 3 | {bio} |
rtax | 3 | {cloud,bio} |
soapaligner | 3 | {bio} |
+ suitename | 3 | {bio} |
yaha | 3 | {bio} |
blimps | 2 | {bio} |
gatb-core | 2 | {bio} |
libctapimkt | 2 | {practice} |
libmuscle | 2 | {bio-dev} |
+ oscar | 2 | {tools,practice,data} |
plasmidseeker | 2 | {bio} |
salmid | 2 | {bio} |
samblaster | 2 | {bio,covid-19} |
@@ -174,6 +173,7 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
ctn | 0 | {imaging-dev} |
cufflinks | 0 | {cloud,bio} |
dextractor | 0 | {covid-19,bio} |
+ eegdev | 0 | {imaging-dev} |
emboss-explorer | 0 | {bio} |
emmax | 0 | {bio} |
fis-gtm | 0 | {his} |
@@ -221,8 +221,8 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
pique | 0 | {bio} |
pplacer | 0 | {bio-phylogeny,bio,covid-19} |
python-bcbio-gff | 0 | {bio-dev} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
q2-sample-classifier | 0 | {bio-dev,bio} |
resfinder-db | 0 | {bio} |
sambamba | 0 | {bio} |
@@ -247,5 +247,5 @@ Last-Update: Sat, 19 Dec 2020 01:42:03 +0000
orthanc-python | -1 | {covid-19} |
sight | -1 | {imaging-dev} |
svim | -1 | {bio} |
-(276 rows)
+(277 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ddf242fef46c5c8f8218b07161bafb50f9bdd58b
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ddf242fef46c5c8f8218b07161bafb50f9bdd58b
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