Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d7fbb984 by Andreas Tille at 2020-12-29T13:46:50+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,146 +1,147 @@
-Last-Update: Tue, 29 Dec 2020 01:42:03 +0000
+Last-Update: Tue, 29 Dec 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 198 | {covid-19,imaging} |
- orthanc | 100 | {imaging,covid-19,practice} |
- orthanc-wsi | 55 | {his,covid-19,imaging,practice,laboratory,oncology} |
- gdcm | 44 | {imaging-dev} |
- htsjdk | 32 | {bio-dev} |
- amide | 31 | {imaging} |
+ dcmtk | 196 | {covid-19,imaging} |
+ orthanc | 101 | {imaging,covid-19,practice} |
+ orthanc-wsi | 54 | {his,covid-19,imaging,practice,laboratory,oncology} |
+ gdcm | 45 | {imaging-dev} |
+ amide | 30 | {imaging} |
+ htsjdk | 30 | {bio-dev} |
dicom3tools | 28 | {imaging} |
dicomscope | 22 | {imaging} |
invesalius | 18 | {imaging} |
gnumed-server | 17 | {covid-19,practice} |
- odin | 17 | {imaging-dev,imaging} |
- dcm2niix | 16 | {imaging} |
- gdcm | 15 | {imaging-dev} |
+ gdcm | 16 | {imaging-dev} |
+ odin | 16 | {imaging-dev,imaging} |
+ dcm2niix | 15 | {imaging} |
nifticlib | 15 | {imaging} |
- adun.app | 14 | {bio} |
gdcm | 14 | {covid-19,imaging} |
minc-tools | 14 | {imaging} |
- ngs-sdk | 14 | {bio-dev} |
- dicomnifti | 12 | {imaging} |
+ adun.app | 13 | {bio} |
+ dicomnifti | 13 | {imaging} |
+ ngs-sdk | 13 | {bio-dev} |
ngs-sdk | 12 | {bio-dev} |
mia | 11 | {imaging} |
obitools | 11 | {bio} |
plastimatch | 11 | {imaging} |
king | 10 | {imaging,typesetting} |
- librg-utils-perl | 10 | {bio} |
openslide | 10 | {imaging} |
vtk-dicom | 10 | {imaging} |
- biosig | 9 | {physics,imaging} |
- ea-utils | 9 | {bio} |
- fastlink | 9 | {bio,cloud} |
+ librg-utils-perl | 9 | {bio} |
melting | 9 | {cloud,bio} |
orthanc-webviewer | 9 | {imaging} |
pixelmed | 9 | {imaging} |
bamkit | 8 | {bio,covid-19} |
+ biosig | 8 | {physics,imaging} |
+ ea-utils | 8 | {bio} |
+ fastlink | 8 | {bio,cloud} |
insighttoolkit4 | 8 | {imaging-dev} |
lagan | 8 | {bio} |
multiqc | 8 | {bio,covid-19} |
- prime-phylo | 8 | {bio,cloud} |
- rambo-k | 8 | {bio} |
- treeview | 8 | {bio,bio-phylogeny} |
- beast-mcmc | 7 | {bio-phylogeny,bio} |
- biojava-live | 7 | {bio-dev} |
bio-tradis | 7 | {bio-dev,bio} |
dicompyler | 7 | {oncology} |
- embassy-domsearch | 7 | {bio,cloud} |
- jebl2 | 7 | {bio-dev} |
- libncl | 7 | {bio} |
- mipe | 7 | {bio,cloud} |
- ngs-sdk | 7 | {bio-dev} |
- nifti2dicom | 7 | {imaging} |
orthanc-dicomweb | 7 | {imaging,covid-19} |
- phybin | 7 | {bio} |
+ prime-phylo | 7 | {bio,cloud} |
pymia | 7 | {imaging-dev} |
- rdp-alignment | 7 | {bio} |
- salmon | 7 | {covid-19,bio} |
+ rambo-k | 7 | {bio} |
seqsero | 7 | {bio} |
- staden | 7 | {bio} |
- arden | 6 | {cloud,bio} |
+ treeview | 7 | {bio,bio-phylogeny} |
+ beast-mcmc | 6 | {bio-phylogeny,bio} |
+ biojava-live | 6 | {bio-dev} |
biomaj3-daemon | 6 | {bio} |
bitseq | 6 | {bio} |
busco | 6 | {bio,covid-19} |
canu | 6 | {bio} |
- embassy-domalign | 6 | {bio,cloud} |
- ipig | 6 | {bio} |
+ embassy-domsearch | 6 | {bio,cloud} |
+ jebl2 | 6 | {bio-dev} |
jellyfish1 | 6 | {bio} |
- jmodeltest | 6 | {bio-phylogeny,bio} |
- libpal-java | 6 | {bio-dev} |
+ libncl | 6 | {bio} |
+ mipe | 6 | {bio,cloud} |
+ ngs-sdk | 6 | {bio-dev} |
+ nifti2dicom | 6 | {imaging} |
orthanc-postgresql | 6 | {imaging} |
phast | 6 | {bio} |
- phyutility | 6 | {cloud,bio} |
- placnet | 6 | {bio} |
- saint | 6 | {bio} |
- zalign | 6 | {bio,cloud} |
- anfo | 5 | {cloud,bio} |
+ phybin | 6 | {bio} |
+ rdp-alignment | 6 | {bio} |
+ staden | 6 | {bio} |
+ arden | 5 | {cloud,bio} |
assemblytics | 5 | {bio} |
bart-view | 5 | {imaging} |
biomaj3-cli | 5 | {cloud} |
- ecopcr | 5 | {bio} |
- fastml | 5 | {bio} |
+ embassy-domalign | 5 | {bio,cloud} |
ghmm | 5 | {bio} |
+ ipig | 5 | {bio} |
lamarc | 5 | {bio} |
libminc | 5 | {imaging-dev} |
- librdp-taxonomy-tree-java | 5 | {bio-dev} |
- mauve-aligner | 5 | {bio} |
orthanc-mysql | 5 | {imaging} |
- pbdagcon | 5 | {bio} |
- piler | 5 | {bio} |
- proalign | 5 | {bio-phylogeny,bio} |
- prottest | 5 | {bio,bio-phylogeny} |
+ phyutility | 5 | {cloud,bio} |
+ placnet | 5 | {bio} |
pscan-chip | 5 | {bio} |
quorum | 5 | {bio} |
- rdp-classifier | 5 | {bio} |
runcircos-gui | 5 | {bio} |
- sga | 5 | {bio} |
- sibsim4 | 5 | {bio,cloud} |
- spaced | 5 | {bio} |
- sprai | 5 | {bio} |
- spread-phy | 5 | {bio,bio-phylogeny} |
- blasr | 4 | {bio,bio-ngs} |
- brig | 4 | {bio} |
+ saint | 5 | {bio} |
+ zalign | 5 | {bio,cloud} |
+ anfo | 4 | {cloud,bio} |
clonalframeml | 4 | {bio,covid-19} |
clonalorigin | 4 | {bio} |
+ ecopcr | 4 | {bio} |
elastix | 4 | {imaging} |
- embassy-domainatrix | 4 | {cloud,bio} |
estscan | 4 | {bio} |
- fsm-lite | 4 | {bio} |
- metaphlan2 | 4 | {bio} |
- mhap | 4 | {bio-ngs,bio} |
- microbegps | 4 | {bio} |
- paraclu | 4 | {cloud,bio} |
- perm | 4 | {cloud,bio} |
- rtax | 4 | {bio,cloud} |
+ fastml | 4 | {bio} |
+ jmodeltest | 4 | {bio-phylogeny,bio} |
+ libpal-java | 4 | {bio-dev} |
+ librdp-taxonomy-tree-java | 4 | {bio-dev} |
+ mauve-aligner | 4 | {bio} |
+ pbdagcon | 4 | {bio} |
+ piler | 4 | {bio} |
+ proalign | 4 | {bio-phylogeny,bio} |
+ prottest | 4 | {bio,bio-phylogeny} |
+ rdp-classifier | 4 | {bio} |
+ salmon | 4 | {covid-19,bio} |
+ sga | 4 | {bio} |
+ sibsim4 | 4 | {bio,cloud} |
soapaligner | 4 | {bio} |
soapsnp | 4 | {bio} |
- stacks | 4 | {bio} |
- surankco | 4 | {bio} |
+ spaced | 4 | {bio} |
+ sprai | 4 | {bio} |
+ spread-phy | 4 | {bio,bio-phylogeny} |
+ blasr | 3 | {bio,bio-ngs} |
+ brig | 3 | {bio} |
delly | 3 | {covid-19,bio} |
- dindel | 3 | {bio} |
+ embassy-domainatrix | 3 | {cloud,bio} |
+ fsm-lite | 3 | {bio} |
getdata | 3 | {bio} |
hinge | 3 | {bio} |
libdivsufsort | 3 | {bio-dev} |
logol | 3 | {bio} |
+ metaphlan2 | 3 | {bio} |
+ mhap | 3 | {bio-ngs,bio} |
+ microbegps | 3 | {bio} |
+ paraclu | 3 | {cloud,bio} |
+ perm | 3 | {cloud,bio} |
qcumber | 3 | {bio} |
+ rtax | 3 | {bio,cloud} |
samblaster | 3 | {bio,covid-19} |
segemehl | 3 | {bio} |
- suitename | 3 | {bio} |
+ stacks | 3 | {bio} |
+ surankco | 3 | {bio} |
tracetuner | 3 | {bio} |
yaha | 3 | {bio} |
blimps | 2 | {bio} |
+ dindel | 2 | {bio} |
gatb-core | 2 | {bio} |
libctapimkt | 2 | {practice} |
libmuscle | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
+ opencfu | 2 | {laboratory} |
plasmidseeker | 2 | {bio} |
samtools-legacy | 2 | {bio-dev} |
sift | 2 | {bio} |
+ suitename | 2 | {bio} |
tvc | 2 | {bio} |
- acedb | 1 | {bio,cloud} |
bustools | 1 | {bio,covid-19} |
+ cat-bat | 1 | {bio,covid-19} |
dextractor | 1 | {covid-19,bio} |
emmax | 1 | {bio} |
htscodecs | 1 | {bio-dev,covid-19} |
@@ -149,7 +150,6 @@ Last-Update: Tue, 29 Dec 2020 01:42:03 +0000
libvistaio | 1 | {imaging-dev} |
nanosv | 1 | {covid-19,bio} |
nifticlib | 1 | {imaging-dev} |
- opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
oscar | 1 | {tools,practice,data} |
@@ -165,17 +165,17 @@ Last-Update: Tue, 29 Dec 2020 01:42:03 +0000
trace2dbest | 1 | {bio} |
vienna-rna | 1 | {covid-19,bio} |
yanagiba | 1 | {bio,covid-19} |
+ acedb | 0 | {bio,cloud} |
atropos | 0 | {bio} |
bambamc | 0 | {bio-dev} |
bbmap | 0 | {bio,covid-19} |
biojava4-live | 0 | {bio-dev} |
- biosig | 0 | {physics} |
- biosig | 0 | {imaging-dev,physics} |
biosig | 0 | {physics,imaging-dev} |
+ biosig | 0 | {imaging-dev,physics} |
+ biosig | 0 | {physics} |
biosyntax | 0 | {bio} |
bmtk | 0 | {psychology} |
camp | 0 | {imaging-dev} |
- cat-bat | 0 | {bio,covid-19} |
ctn | 0 | {imaging-dev} |
cufflinks | 0 | {cloud,bio} |
eegdev | 0 | {imaging-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d7fbb98475a0f16d208aa547cf54e74c8a22cfc9
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d7fbb98475a0f16d208aa547cf54e74c8a22cfc9
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20201229/aa62346c/attachment-0001.html>