[med-svn] [Git][med-team/community/helper-scripts][master] automatic update
Andreas Tille
gitlab at salsa.debian.org
Fri Feb 28 01:45:49 GMT 2020
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
429b4247 by Andreas Tille at 2020-02-28T01:45:45+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
+Last-Update: Fri, 28 Feb 2020 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
+Last-Update: Fri, 28 Feb 2020 01:42:04 +0000
source | version | upstream_version | uploaders | Last uploader | Last uploaded
-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------
@@ -6,7 +6,6 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
artemis | 17.0.1 | 18.1.0 | Andreas Tille | Andreas Tille | 2019-02-08 11:19:24+00
atropos | 1.1.24 | 2.0.0-alpha.4 | Andreas Tille | Steffen Moeller | 2019-11-30 12:19:31+00
baitfisher | 1.2.7+git20180107.e92dbf2 | 1.2.7+git20190123.241d060 | Olivier Sallou | Andreas Tille | 2018-09-24 13:04:18+00
- bbmap | 38.73 | 38.79 | Andreas Tille | Andreas Tille | 2019-11-22 21:04:16+00
beast2-mcmc | 2.6.0 | 2.6.1 | Andreas Tille,Olivier Sallou | Andreas Tille | 2019-07-31 13:08:02+00
biobambam2 | 2.0.153 | 2.0.156+ds | Andreas Tille | Andreas Tille | 2020-02-05 13:20:41+00
biojava-live | 1.7.1 | 1.9.3 | Andreas Tille,Olivier Sallou,Steffen Moeller | Andreas Tille | 2018-11-12 15:49:23+00
@@ -15,7 +14,6 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
biomaj3-download | 3.1.0 | 3.1.2 | Olivier Sallou | Olivier Sallou | 2019-11-12 13:19:24+00
biomaj3-process | 3.0.15 | 3.0.16 | Olivier Sallou | Olivier Sallou | 2019-11-12 11:20:38+00
charls | 2.0.0 | 2.1.0 | Andreas Tille | Andreas Tille | 2019-01-10 20:10:56+00
- clonalframeml | 1.11 | 1.12 | Andreas Tille | Andreas Tille | 2019-05-23 07:03:34+00
dcm2niix | 1.0.20181125 | 1.0.20190902 | Ghislain Antony Vaillant | Andreas Tille | 2019-01-30 10:04:52+00
ea-utils | 1.1.2 | 1.04.807 | Andreas Tille,Tim Booth | Andreas Tille | 2018-04-26 21:48:01+00
elastix | 4.9.0 | 5.0.0 | Gert Wollny,Steve M. Robbins | Andreas Tille | 2019-01-15 11:50:11+00
@@ -24,7 +22,6 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
fis-gtm | 6.3-007 | 6.3-010 | Amul Shah,Andreas Tille | Amul Shah | 2019-02-28 14:12:19+00
gatb-core | 1.4.1+git20191209.9398f28 | 1.4.1+git20200118.1dc23ff | Andreas Tille,Nadiya Sitdykova | Michael R. Crusoe | 2020-02-17 14:52:30+00
gdcm | 3.0.4 | 3.0.5 | Gert Wollny,Sébastien Jodogne,Steve M. Robbins | Gert Wollny | 2019-11-07 11:49:02+00
- gnumed-server | 22.8 | 22.9 | Andreas Tille,Sebastian Hilbert | Andreas Tille | 2019-11-13 15:20:32+00
hdmf | 1.5.4 | 1.6.0 | Yaroslav Halchenko | Yaroslav Halchenko | 2020-02-03 03:01:25+00
htsjdk | 2.18.2 | 2.21.2 | Andreas Tille,Charles Plessy,Olivier Sallou,Vincent Danjean | Andreas Tille | 2019-03-01 22:19:40+00
hyphy | 2.5.1 | 2.5.4 | Andreas Tille | Andreas Tille | 2020-01-07 21:19:50+00
@@ -82,7 +79,7 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
unanimity | 3.3.0 | 4.2.0 | Afif Elghraoui,Andreas Tille | Adrian Bunk | 2019-02-06 07:34:42+00
vsearch | 2.14.1 | 2.14.2 | Andreas Tille,Tim Booth | Andreas Tille | 2019-12-17 10:07:09+00
xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00
-(80 rows)
+(77 rows)
source | id | severity | title
@@ -105,7 +102,6 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
biojava4-live | 843712 | normal | biojava4-live: FTBFS (failing tests)
biojava-live | 659824 | minor | biojava-live: New version available
biomaj3 | 950914 | minor | python3-biomaj3: Depends on python-influxdb wich ftbs, patch to remove dependency
- brig | 952624 | serious | brig: FTBFS: build-dependency not installable: blast2
bwa | 942447 | normal | Build bwa on ppc64el
camp | 900181 | normal | camp: FTBFS on 32bit big endian: check metaclass->function("f4").call(object, camp::Args(1, 4, 15)).to<unsigned long>() == 20 has failed
cfflib | 936285 | serious | cfflib: Python2 removal in sid/bullseye
@@ -157,7 +153,6 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
ghmm | 936609 | normal | ghmm: Python2 removal in sid/bullseye
gnumed-client | 936630 | serious | gnumed-client: Python2 removal in sid/bullseye
gnumed-client | 952633 | wishlist | gnumed-client: hints for py3 packaging
- gnumed-server | 936631 | normal | gnumed-server: Python2 removal in sid/bullseye
harvest-tools | 943055 | normal | harvest-tools: Python2 removal in sid/bullseye
hinge | 952615 | serious | hinge: FTBFS: fmt.h:22:10: fatal error: spdlog/fmt/bundled/core.h: No such file or directory
htsjdk | 877590 | normal | FTBFS: error: package org.testng does not exist
@@ -214,9 +209,7 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
orthanc-webviewer | 828949 | minor | orthanc-webviewer: "better" suggestion for cache location
paleomix | 933750 | normal | paleomix: Port to Python3 needed
paleomix | 937232 | normal | paleomix: Python2 removal in sid/bullseye
- pbalign | 937252 | serious | pbalign: Python2 removal in sid/bullseye
pbbam | 829741 | important | pbbam: FTBFS (32-bit): pbmerge assertion failure
- pbbarcode | 937253 | serious | pbbarcode: Python2 removal in sid/bullseye
pbgenomicconsensus | 937255 | serious | pbgenomicconsensus: Python2 removal in sid/bullseye
pbh5tools | 937256 | serious | pbh5tools: Python2 removal in sid/bullseye
pdb2pqr | 937262 | normal | pdb2pqr: Python2 removal in sid/bullseye
@@ -267,7 +260,6 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
simpleitk | 949355 | serious | simpleitk FTBFS: test failures
skesa | 952627 | serious | skesa: FTBFS: ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/libncbi-vdb.so: undefined reference to `vdb_mbedtls_entropy_init'
smalr | 938500 | serious | smalr: Python2 removal in sid/bullseye
- smrtanalysis | 945737 | serious | smrtanalysis: Python2 removal in sid/bullseye
snakemake | 943956 | wishlist | snakemake: please make the build reproducible
snap | 927011 | minor | snap: Package info contains a 404 url
snap-aligner | 848589 | normal | snap-aligner: Build requires 188 GB of memory (fortunately not used, just allocated)
@@ -291,5 +283,5 @@ Last-Update: Thu, 27 Feb 2020 13:42:04 +0000
xmedcon | 671828 | normal | xmedcon: Cannot open file with YBR photometric interpretation
xmedcon | 779707 | normal | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
xmedcon | 924017 | normal | desktop entry
-(204 rows)
+(199 rows)
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/429b424764c0488a1900f304b2bbc11f54ee9a72
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/429b424764c0488a1900f304b2bbc11f54ee9a72
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