[med-svn] [Git][med-team/snakemake][upstream] 2 commits: New upstream version 5.8.2

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / snakemake


Commits:
729f363d by Michael R. Crusoe at 2019-12-16T11:19:00Z
New upstream version 5.8.2
- - - - -
a41c77bf by Michael R. Crusoe at 2020-01-01T13:05:53Z
New upstream version 5.9.1
- - - - -


30 changed files:

- + .github/CODEOWNERS
- .github/workflows/main.yml
- CHANGELOG.rst
- docs/executing/caching.rst
- docs/index.rst
- docs/snakefiles/deployment.rst
- docs/snakefiles/rules.rst
- docs/tutorial/setup.rst
- docs/tutorial/short.rst
- misc/vim/syntax/snakemake.vim
- + motoState.p
- setup.py
- snakemake/__init__.py
- snakemake/_version.py
- snakemake/caching/__init__.py
- snakemake/caching/hash.py
- snakemake/caching/local.py
- snakemake/caching/remote.py
- snakemake/cwl.py
- snakemake/dag.py
- + snakemake/deployment/__init__.py
- snakemake/conda.py → snakemake/deployment/conda.py
- + snakemake/deployment/env_modules.py
- snakemake/singularity.py → snakemake/deployment/singularity.py
- snakemake/executors.py
- snakemake/io.py
- snakemake/jobs.py
- snakemake/logging.py
- snakemake/parser.py
- snakemake/report/__init__.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/compare/b0aad4a0df82884e1e3e59436cbd743d5caed5f8...a41c77bf4659faea3efefd7aa8ed8e75879b2c7f

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/compare/b0aad4a0df82884e1e3e59436cbd743d5caed5f8...a41c77bf4659faea3efefd7aa8ed8e75879b2c7f
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