[med-svn] [Git][med-team/diamond-aligner][master] 2 commits: Enable build on any

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / diamond-aligner


Commits:
7ffa5f7a by Frédéric Bonnard at 2020-01-10T12:31:21+00:00
Enable build on any

On ppc (and arm*, s390*), char is unsigned, so let's be more
specific in the declaration of score_matrix.cpp

- - - - -
6f56988a by Andreas Tille at 2020-01-10T12:31:21+00:00
Merge branch 'enable-more-arches' into 'master'

Enable build on any

See merge request med-team/diamond-aligner!1
- - - - -


3 changed files:

- debian/control
- + debian/patches/fix-unsigned-char-by-default-arches.patch
- debian/patches/series


Changes:

=====================================
debian/control
=====================================
@@ -12,7 +12,7 @@ Vcs-Git: https://salsa.debian.org/med-team/diamond-aligner.git
 Homepage: https://github.com/bbuchfink/diamond
 
 Package: diamond-aligner
-Architecture: amd64
+Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
 Recommends: med-config (>= 2.1)


=====================================
debian/patches/fix-unsigned-char-by-default-arches.patch
=====================================
@@ -0,0 +1,18 @@
+--- a/src/basic/score_matrix.cpp
++++ b/src/basic/score_matrix.cpp
+@@ -36,7 +36,7 @@
+ 
+ const double INT2_MAX = std::numeric_limits<double>::max();
+ 
+-const char DNA_scores[5 * 5] = {
++const signed char DNA_scores[5 * 5] = {
+ 	2, -3, -3, -3, -3,
+ 	-3,2,-3,-3,-3,
+ 	-3,-3,2,-3,-3,
+@@ -317,4 +317,4 @@
+ 	constants[3] = lambda;
+ 	constants[4] = K;
+ 	constants_ = constants;
+-}
+\ No newline at end of file
++}


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
 avoid_unwanted_optimisation.patch
 82feea2aee5c82e283704b9317cb5e8abc625f90.patch
+fix-unsigned-char-by-default-arches.patch



View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/compare/e8642d330bf255334d1c6a26e1df6d2214571233...6f56988aed2194504aebdc22b63867765cd62d76

-- 
View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/compare/e8642d330bf255334d1c6a26e1df6d2214571233...6f56988aed2194504aebdc22b63867765cd62d76
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