Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
051d2d28 by Andreas Tille at 2020-07-01T13:43:57+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,62 +1,65 @@
-Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
+Last-Update: Wed, 01 Jul 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 180 | {covid-19,imaging} |
- orthanc | 94 | {covid-19,imaging,practice} |
- gdcm | 45 | {imaging-dev} |
+ orthanc | 93 | {covid-19,imaging,practice} |
+ gdcm | 46 | {imaging-dev} |
orthanc-wsi | 44 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 36 | {bio-dev} |
+ htsjdk | 35 | {bio-dev} |
dcm2niix | 22 | {imaging} |
dicomscope | 20 | {imaging} |
+ gnumed-server | 19 | {practice,covid-19} |
dicom3tools | 18 | {imaging} |
- gnumed-server | 18 | {practice,covid-19} |
- gdcm | 17 | {covid-19,imaging} |
- ngs-sdk | 17 | {bio-dev} |
+ ngs-sdk | 18 | {bio-dev} |
+ gdcm | 16 | {covid-19,imaging} |
gdcm | 12 | {imaging-dev} |
- insighttoolkit4 | 11 | {imaging-dev} |
+ insighttoolkit4 | 12 | {imaging-dev} |
+ jebl2 | 12 | {bio-dev} |
invesalius | 11 | {imaging} |
- jebl2 | 11 | {bio-dev} |
minc-tools | 10 | {imaging} |
adun.app | 9 | {bio} |
melting | 9 | {bio,cloud} |
+ ngs-sdk | 9 | {bio-dev} |
openslide | 9 | {imaging} |
pixelmed | 9 | {imaging} |
psychopy | 9 | {psychology} |
king | 8 | {imaging,typesetting} |
lagan | 8 | {bio} |
- ngs-sdk | 8 | {bio-dev} |
+ libdivsufsort | 8 | {bio-dev} |
+ maqview | 8 | {bio} |
obitools | 8 | {bio} |
+ pymia | 8 | {imaging-dev} |
stacks | 8 | {bio} |
+ treeview | 8 | {bio-phylogeny,bio} |
biosig4c++ | 7 | {physics,imaging} |
dicompyler | 7 | {oncology} |
+ ea-utils | 7 | {bio} |
fastlink | 7 | {cloud,bio} |
- libdivsufsort | 7 | {bio-dev} |
+ king-probe | 7 | {bio} |
libminc | 7 | {imaging-dev} |
librg-utils-perl | 7 | {bio} |
- maqview | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
+ paraclu | 7 | {cloud,bio} |
plastimatch | 7 | {imaging} |
- pymia | 7 | {imaging-dev} |
seqsero | 7 | {bio} |
- treeview | 7 | {bio-phylogeny,bio} |
vtk-dicom | 7 | {imaging} |
anfo | 6 | {bio,cloud} |
biojava-live | 6 | {bio-dev} |
- ea-utils | 6 | {bio} |
jaligner | 6 | {bio} |
- king-probe | 6 | {bio} |
+ mlv-smile | 6 | {bio,cloud} |
ncbi-seg | 6 | {bio} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
- paraclu | 6 | {cloud,bio} |
sibsim4 | 6 | {bio,cloud} |
sigma-align | 6 | {bio-phylogeny,cloud,bio} |
staden | 6 | {bio} |
+ zalign | 6 | {cloud,bio} |
biomaj3-cli | 5 | {cloud} |
ecopcr | 5 | {bio} |
+ gatb-core | 5 | {bio} |
+ getdata | 5 | {bio} |
microbegps | 5 | {bio} |
mipe | 5 | {cloud,bio} |
- mlv-smile | 5 | {bio,cloud} |
neobio | 5 | {cloud,bio} |
orthanc-mysql | 5 | {imaging} |
phyutility | 5 | {bio,cloud} |
@@ -68,7 +71,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
squizz | 5 | {bio,cloud} |
tnseq-transit | 5 | {covid-19,bio} |
transtermhp | 5 | {bio} |
- zalign | 5 | {cloud,bio} |
alter-sequence-alignment | 4 | {bio} |
ampliconnoise | 4 | {cloud,bio} |
bandage | 4 | {bio} |
@@ -80,8 +82,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
embassy-domainatrix | 4 | {cloud,bio} |
embassy-domalign | 4 | {cloud,bio} |
embassy-domsearch | 4 | {bio,cloud} |
- gatb-core | 4 | {bio} |
- getdata | 4 | {bio} |
ghmm | 4 | {bio} |
ipig | 4 | {bio} |
libncl | 4 | {bio} |
@@ -97,6 +97,7 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
predictprotein | 4 | {bio} |
proalign | 4 | {bio-phylogeny,bio} |
probabel | 4 | {cloud,bio} |
+ qrisk2 | 4 | {practice} |
rambo-k | 4 | {bio} |
rdp-classifier | 4 | {bio} |
relion | 4 | {bio} |
@@ -113,6 +114,7 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
beast2-mcmc | 3 | {bio} |
beast-mcmc | 3 | {bio-phylogeny,bio} |
bio-rainbow | 3 | {bio} |
+ biosig4c++ | 3 | {physics,imaging-dev} |
bio-tradis | 3 | {bio-dev,bio} |
bitseq | 3 | {bio} |
canu | 3 | {bio} |
@@ -124,7 +126,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
dazzdb | 3 | {bio} |
dindel | 3 | {bio} |
dwgsim | 3 | {bio} |
- elph | 3 | {bio} |
estscan | 3 | {bio} |
fastml | 3 | {bio} |
fsm-lite | 3 | {bio} |
@@ -148,7 +149,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
pscan-chip | 3 | {bio} |
pscan-tfbs | 3 | {bio} |
qcumber | 3 | {bio} |
- qrisk2 | 3 | {practice} |
quorum | 3 | {bio} |
radiant | 3 | {bio} |
rampler | 3 | {bio} |
@@ -177,7 +177,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
logol | 2 | {bio} |
nanook | 2 | {bio,covid-19} |
ncbi-vdb | 2 | {bio-dev} |
- ngs-sdk | 2 | {bio-dev} |
oscar | 2 | {practice,tools,data} |
pbdagcon | 2 | {bio} |
phipack | 2 | {bio} |
@@ -193,10 +192,12 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
gatb-core | 1 | {bio-dev} |
htscodecs | 1 | {covid-19,bio-dev} |
libchado-perl | 1 | {bio-dev} |
+ libdisorder | 1 | {bio-dev} |
libmaus2 | 1 | {covid-19,bio-dev} |
libmialm | 1 | {imaging-dev} |
libsbml | 1 | {bio-dev} |
libxdf | 1 | {imaging-dev} |
+ ngs-sdk | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
pbcopper | 1 | {bio-dev} |
@@ -211,6 +212,7 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
volpack | 1 | {imaging-dev} |
wtdbg2 | 1 | {covid-19} |
acedb | 0 | {cloud,bio} |
+ augur | 0 | {covid-19,bio} |
bambamc | 0 | {bio-dev} |
bbmap | 0 | {covid-19} |
biojava4-live | 0 | {bio-dev} |
@@ -233,7 +235,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
libbpp-raa | 0 | {bio-dev} |
libbpp-seq | 0 | {bio-dev} |
libbpp-seq-omics | 0 | {bio-dev} |
- libdisorder | 0 | {bio-dev} |
libgenome | 0 | {bio-dev} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
@@ -260,8 +261,8 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
pbseqlib | 0 | {bio-dev} |
pilercr | 0 | {bio} |
quicktree | 0 | {bio,covid-19,bio-phylogeny} |
- relion | 0 | {bio} |
relion | 0 | {bio-dev} |
+ relion | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
@@ -275,7 +276,6 @@ Last-Update: Wed, 01 Jul 2020 01:42:04 +0000
varna | 0 | {bio} |
varscan | 0 | {covid-19,bio} |
vtk-dicom | 0 | {imaging-dev} |
- augur | -1 | {covid-19,bio} |
bustools | -1 | {bio,covid-19} |
pycoqc | -1 | {covid-19,bio} |
shovill | -1 | {bio,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/051d2d28a28a4d6bbb3ab3cf4461b790e504224a
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/051d2d28a28a4d6bbb3ab3cf4461b790e504224a
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200701/554aac20/attachment-0001.html>