[med-svn] [Git][med-team/edtsurf][master] 11 commits: DEP3
Andreas Tille
gitlab at salsa.debian.org
Mon Jul 6 09:16:01 BST 2020
Andreas Tille pushed to branch master at Debian Med / edtsurf
Commits:
78f00ced by Andreas Tille at 2020-07-06T10:04:10+02:00
DEP3
- - - - -
a131fe60 by Andreas Tille at 2020-07-06T10:04:33+02:00
routine-update: Standards-Version: 4.5.0
- - - - -
a4cae87d by Andreas Tille at 2020-07-06T10:04:33+02:00
routine-update: debhelper-compat 13
- - - - -
b3d04dbd by Andreas Tille at 2020-07-06T10:04:36+02:00
routine-update: Remove trailing whitespace in debian/rules
- - - - -
d5962f35 by Andreas Tille at 2020-07-06T10:04:36+02:00
routine-update: Add salsa-ci file
- - - - -
b2cc8d8a by Andreas Tille at 2020-07-06T10:04:36+02:00
routine-update: Rules-Requires-Root: no
- - - - -
397be35a by Andreas Tille at 2020-07-06T10:04:40+02:00
Use secure URI in Homepage field.
Changes-By: lintian-brush
Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html
- - - - -
2da041ce by Andreas Tille at 2020-07-06T10:04:40+02:00
Set field Upstream-Contact in debian/copyright.
Changes-By: lintian-brush
- - - - -
729e1c07 by Andreas Tille at 2020-07-06T10:04:43+02:00
Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright).
Changes-By: lintian-brush
- - - - -
7fe94c4c by Andreas Tille at 2020-07-06T10:08:04+02:00
Add include-binaries to mention binary data files
- - - - -
5d18eafe by Andreas Tille at 2020-07-06T10:15:40+02:00
Upload to unstable
- - - - -
9 changed files:
- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- debian/patches/fix_return_values.patch
- debian/rules
- + debian/salsa-ci.yml
- + debian/source/include-binaries
- debian/upstream/metadata
Changes:
=====================================
debian/changelog
=====================================
@@ -1,5 +1,6 @@
-edtsurf (0.2009-7) UNRELEASED; urgency=medium
+edtsurf (0.2009-7) unstable; urgency=medium
+ [ Pranav Ballaney ]
* Add test data and references
* Make a new binary package for examples
* Patch to fix return values
@@ -7,6 +8,17 @@ edtsurf (0.2009-7) UNRELEASED; urgency=medium
* Install docs
* Add Pranav Ballaney to Uploaders
+ [ Andreas Tille ]
+ * Standards-Version: 4.5.0 (routine-update)
+ * debhelper-compat 13 (routine-update)
+ * Remove trailing whitespace in debian/rules (routine-update)
+ * Add salsa-ci file (routine-update)
+ * Rules-Requires-Root: no (routine-update)
+ * Use secure URI in Homepage field.
+ * Set field Upstream-Contact in debian/copyright.
+ * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
+ present in machine-readable debian/copyright).
+
-- Pranav Ballaney <ballaneypranav at gmail.com> Mon, 06 Jul 2020 12:52:53 +0530
edtsurf (0.2009-6) unstable; urgency=medium
=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11
=====================================
debian/control
=====================================
@@ -5,11 +5,12 @@ Uploaders: Steffen Moeller <moeller at debian.org>,
Pranav Ballaney <ballaneypranav at gmail.com>
Section: science
Priority: optional
-Build-Depends: debhelper (>= 11~)
-Standards-Version: 4.2.1
+Build-Depends: debhelper-compat (= 13)
+Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/edtsurf
Vcs-Git: https://salsa.debian.org/med-team/edtsurf.git
-Homepage: http://zhanglab.ccmb.med.umich.edu/EDTSurf/
+Homepage: https://zhanglab.ccmb.med.umich.edu/EDTSurf/
+Rules-Requires-Root: no
Package: edtsurf
Architecture: any
@@ -34,4 +35,4 @@ Description: triangulated mesh surfaces for protein structures
van der Waals surface, solvent-accessible surface and molecular surface
(solvent-excluded surface). EDTsurf also identifies cavities which are
inside of macromolecules.
- This packages contains some examples for EDTSurf.
+ This package contains some examples for EDTSurf.
=====================================
debian/copyright
=====================================
@@ -1,6 +1,7 @@
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: edtsurf
Source: http://zhanglab.ccmb.med.umich.edu/EDTSurf
+Upstream-Contact: Yang Zhang <zhng at umich.edu>
Files: *
Copyright: 2009 Dong Xu and Yang Zhang <zhng at umich.edu>
=====================================
debian/patches/fix_return_values.patch
=====================================
@@ -1,3 +1,7 @@
+Author: Pranav Ballaney
+Last-Update: 2020-07-06 12:51:20 +0530
+Description: Return 0 on success
+
--- a/EDTSurf.cpp
+++ b/EDTSurf.cpp
@@ -36,7 +36,7 @@ int main(int argc, char** argv)
=====================================
debian/rules
=====================================
@@ -7,7 +7,7 @@
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
%:
- dh $@
+ dh $@
override_dh_clean:
dh_clean
=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
=====================================
debian/source/include-binaries
=====================================
@@ -0,0 +1,3 @@
+debian/tests/ref/4we2.ply.gz
+debian/tests/ref/4we2-cav.pdb.gz
+debian/tests/data/4we2.pdb.gz
=====================================
debian/upstream/metadata
=====================================
@@ -1,5 +1,3 @@
-Contact: Yang Zhang <zhng at umich.edu>
-Name: EDTSurf
Reference:
AUTHOR: Dong Xu and Yang Zhang
TITLE: >
View it on GitLab: https://salsa.debian.org/med-team/edtsurf/-/compare/96f64ced72b012732dacd52f1b3417012d507aff...5d18eafef6fab93c7ca4c1c14757f055d87ae8e0
--
View it on GitLab: https://salsa.debian.org/med-team/edtsurf/-/compare/96f64ced72b012732dacd52f1b3417012d507aff...5d18eafef6fab93c7ca4c1c14757f055d87ae8e0
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