Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
2bdd74bf by Andreas Tille at 2020-07-09T13:44:03+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,43 +1,43 @@
-Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
+Last-Update: Thu, 09 Jul 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 188 | {covid-19,imaging} |
+ dcmtk | 186 | {covid-19,imaging} |
orthanc | 95 | {covid-19,imaging,practice} |
gdcm | 45 | {imaging-dev} |
- orthanc-wsi | 44 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 32 | {bio-dev} |
- dcm2niix | 24 | {imaging} |
+ orthanc-wsi | 43 | {his,practice,covid-19,laboratory,imaging,oncology} |
+ htsjdk | 33 | {bio-dev} |
dicom3tools | 24 | {imaging} |
- dicomscope | 23 | {imaging} |
+ dcm2niix | 23 | {imaging} |
+ dicomscope | 22 | {imaging} |
gnumed-server | 18 | {practice,covid-19} |
- ngs-sdk | 18 | {bio-dev} |
- gdcm | 16 | {covid-19,imaging} |
- invesalius | 14 | {imaging} |
+ ngs-sdk | 17 | {bio-dev} |
+ gdcm | 15 | {covid-19,imaging} |
gdcm | 13 | {imaging-dev} |
+ insighttoolkit4 | 13 | {imaging-dev} |
+ invesalius | 13 | {imaging} |
pixelmed | 13 | {imaging} |
- insighttoolkit4 | 12 | {imaging-dev} |
jebl2 | 12 | {bio-dev} |
minc-tools | 12 | {imaging} |
- vtk-dicom | 11 | {imaging} |
- biosig4c++ | 9 | {physics,imaging} |
+ vtk-dicom | 10 | {imaging} |
+ lagan | 9 | {bio} |
libdivsufsort | 9 | {bio-dev} |
- ngs-sdk | 9 | {bio-dev} |
openslide | 9 | {imaging} |
adun.app | 8 | {bio} |
- dicompyler | 8 | {oncology} |
+ biosig4c++ | 8 | {physics,imaging} |
king | 8 | {imaging,typesetting} |
- lagan | 8 | {bio} |
melting | 8 | {bio,cloud} |
+ ngs-sdk | 8 | {bio-dev} |
plastimatch | 8 | {imaging} |
psychopy | 8 | {psychology} |
+ dicompyler | 7 | {oncology} |
libminc | 7 | {imaging-dev} |
+ librg-utils-perl | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
stacks | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
biojava-live | 6 | {bio-dev} |
ea-utils | 6 | {bio} |
- librg-utils-perl | 6 | {bio} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
paraclu | 6 | {cloud,bio} |
anfo | 5 | {bio,cloud} |
@@ -61,6 +61,7 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
mhap | 4 | {bio-ngs,bio} |
mipe | 4 | {cloud,bio} |
neobio | 4 | {cloud,bio} |
+ nutsqlite | 4 | {tools} |
orthanc-postgresql | 4 | {imaging} |
phyutility | 4 | {bio,cloud} |
piler | 4 | {bio} |
@@ -91,7 +92,6 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
microbegps | 3 | {bio} |
mrs | 3 | {bio} |
multiqc | 3 | {bio,covid-19} |
- nutsqlite | 3 | {tools} |
perm | 3 | {cloud,bio} |
placnet | 3 | {bio} |
proalign | 3 | {bio-phylogeny,bio} |
@@ -112,7 +112,6 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
beast2-mcmc | 2 | {bio} |
beast-mcmc | 2 | {bio-phylogeny,bio} |
bio-rainbow | 2 | {bio} |
- biosig4c++ | 2 | {physics,imaging-dev} |
bio-tradis | 2 | {bio-dev,bio} |
bitseq | 2 | {bio} |
blasr | 2 | {bio,bio-ngs} |
@@ -141,6 +140,7 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
metaphlan2 | 2 | {bio} |
murasaki | 2 | {bio} |
ncbi-vdb | 2 | {bio-dev} |
+ openslide | 2 | {imaging-dev} |
patman | 2 | {bio} |
pbdagcon | 2 | {bio} |
phast | 2 | {bio} |
@@ -182,9 +182,7 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
libdisorder | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
- ngs-sdk | 1 | {bio-dev} |
opencfu | 1 | {laboratory} |
- openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
oscar | 1 | {practice,tools,data} |
pbcopper | 1 | {bio-dev} |
@@ -249,6 +247,7 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
mssstest | 0 | {tools} |
murasaki | 0 | {bio} |
nanosv | 0 | {bio,covid-19} |
+ ngs-sdk | 0 | {bio-dev} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
@@ -256,8 +255,8 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
pilercr | 0 | {bio} |
python-py2bit | 0 | {bio,bio-dev} |
quicktree | 0 | {bio,covid-19,bio-phylogeny} |
- relion | 0 | {bio} |
relion | 0 | {bio-dev} |
+ relion | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
@@ -275,5 +274,5 @@ Last-Update: Thu, 09 Jul 2020 01:42:03 +0000
pycoqc | -1 | {covid-19,bio} |
shovill | -1 | {bio,covid-19} |
yanagiba | -1 | {bio,covid-19} |
-(302 rows)
+(301 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2bdd74bf16107bc1c742818e61d2752b3dc90a75
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2bdd74bf16107bc1c742818e61d2752b3dc90a75
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