[med-svn] [Git][med-team/ampliconnoise][master] 2 commits: New binary package featuring example data for testing

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / ampliconnoise


Commits:
61348245 by Andreas Tille at 2020-07-09T17:19:04+02:00
New binary package featuring example data for testing

- - - - -
b4df48d4 by Andreas Tille at 2020-07-09T17:33:09+02:00
Upload to unstable

- - - - -


6 changed files:

- debian/README.test
- + debian/ampliconnoise-examples.install
- debian/docs → debian/ampliconnoise.docs
- debian/changelog
- debian/control
- − debian/examples


Changes:

=====================================
debian/README.test
=====================================
@@ -3,6 +3,7 @@ Notes on how this package can be tested.
 
 This package can be tested by running the provided test:
 
+    sudo apt install ampliconnoise-examples
     sh run-unit-test
 
 in order to confirm its integrity.


=====================================
debian/ampliconnoise-examples.install
=====================================
@@ -0,0 +1,3 @@
+debian/tests/ref	usr/share/doc/ampliconnoise/examples
+debian/tests/Run.sh	usr/share/doc/ampliconnoise/examples
+Test/C005.dat		usr/share/doc/ampliconnoise/examples


=====================================
debian/docs → debian/ampliconnoise.docs
=====================================


=====================================
debian/changelog
=====================================
@@ -1,4 +1,4 @@
-ampliconnoise (1.29-9) UNRELEASED; urgency=medium
+ampliconnoise (1.29-9) unstable; urgency=medium
 
   [ Andreas Tille ]
   * Fix edam syntax input+output is singular
@@ -12,7 +12,6 @@ ampliconnoise (1.29-9) UNRELEASED; urgency=medium
   * Add autopkgtests
   * Install docs
   * Add Pranav Ballaney to Uploaders
-  * Update changelog
 
   [ Andreas Tille ]
   * Standards-Version: 4.5.0 (routine-update)
@@ -23,6 +22,7 @@ ampliconnoise (1.29-9) UNRELEASED; urgency=medium
   * Trim trailing whitespace.
   * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
     Repository-Browse.
+  * New binary package featuring example data for testing
 
  -- Pranav Ballaney <ballaneypranav at gmail.com>  Thu, 09 Jul 2020 13:17:25 +0530
 


=====================================
debian/control
=====================================
@@ -32,3 +32,22 @@ Description: removal of noise from 454 sequenced PCR amplicons
  Previously there was a standalone "Pyronoise" by the same authors and
  this package includes an updated version.  There is also a "Denoiser"
  in Qiime which is related but distinct.
+
+Package: ampliconnoise-examples
+Architecture: all
+Depends: ${misc:Depends},
+Enhances: ampliconnoise
+Description: removal of noise from 454 sequenced PCR amplicons (example data)
+ AmpliconNoise is a package of applications to clean up high-throughput
+ sequence data.  It consists of three main parts:
+ .
+ Pyronoise - does flowgram-based clustering to spot misreads
+ SeqNoise - removes PCR point mutations
+ Perseus - removes PCR chimeras without the need for a set of reference
+ sequences
+ .
+ Previously there was a standalone "Pyronoise" by the same authors and
+ this package includes an updated version.  There is also a "Denoiser"
+ in Qiime which is related but distinct.
+ .
+ This package contains example data for ampliconnoise.


=====================================
debian/examples deleted
=====================================
@@ -1,3 +0,0 @@
-debian/tests/ref
-debian/tests/Run.sh
-Test/C005.dat
\ No newline at end of file



View it on GitLab: https://salsa.debian.org/med-team/ampliconnoise/-/compare/30fb5d6056d6425d9f1805ea8c9081d60de194be...b4df48d4253b6ea79823ad05d055cd81121d5b32

-- 
View it on GitLab: https://salsa.debian.org/med-team/ampliconnoise/-/compare/30fb5d6056d6425d9f1805ea8c9081d60de194be...b4df48d4253b6ea79823ad05d055cd81121d5b32
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