[med-svn] [Git][med-team/gneiss][master] Disable radial functionality until either Bokeh is packaged or someone comes...

[Shayan Doust]

Shayan Doust pushed to branch master at Debian Med / gneiss


Commits:
3dd1c6a5 by Shayan Doust at 2020-07-09T19:00:16+01:00
Disable radial functionality until either Bokeh is packaged or someone comes up with migrating to another dependency like matplotlib

- - - - -


2 changed files:

- + debian/patches/disable_test_radial.patch
- + debian/patches/series


Changes:

=====================================
debian/patches/disable_test_radial.patch
=====================================
@@ -0,0 +1,29 @@
+Description: disable radial functionality and tests temporarily
+ Requires Bokeh however this big software is not packaged yet. Radial plots seem to be the only affected visualisation.
+Author: Shayan Doust <hello at shayandoust.me> 
+Last-Update: 2020-07-09
+---
+
+--- gneiss.orig/gneiss/plot/tests/test_radial.py
++++ gneiss/gneiss/plot/tests/test_radial.py
+@@ -1,3 +1,4 @@
++"""
+ import unittest
+ import pandas as pd
+ import numpy as np
+@@ -104,3 +105,4 @@
+ 
+ if __name__ == "__main__":
+     unittest.main()
++"""
+--- gneiss.orig/gneiss/plot/__init__.py
++++ gneiss/gneiss/plot/__init__.py
+@@ -26,7 +26,7 @@
+ # ----------------------------------------------------------------------------
+ 
+ from ._heatmap import heatmap
+-from ._radial import radialplot
++#from ._radial import radialplot
+ from ._decompose import balance_boxplot, balance_barplots, proportion_plot
+ 
+ 


=====================================
debian/patches/series
=====================================
@@ -0,0 +1 @@
+disable_test_radial.patch



View it on GitLab: https://salsa.debian.org/med-team/gneiss/-/commit/3dd1c6a5367e62e0a5c3244631733317725af33c

-- 
View it on GitLab: https://salsa.debian.org/med-team/gneiss/-/commit/3dd1c6a5367e62e0a5c3244631733317725af33c
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