Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
2feb7698 by Andreas Tille at 2020-07-12T13:44:04+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,43 +1,43 @@
-Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
+Last-Update: Sun, 12 Jul 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 182 | {covid-19,imaging} |
- orthanc | 93 | {covid-19,imaging,practice} |
- gdcm | 43 | {imaging-dev} |
- orthanc-wsi | 43 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 33 | {bio-dev} |
- dicom3tools | 24 | {imaging} |
- dcm2niix | 23 | {imaging} |
+ dcmtk | 178 | {covid-19,imaging} |
+ orthanc | 90 | {covid-19,imaging,practice} |
+ gdcm | 44 | {imaging-dev} |
+ orthanc-wsi | 42 | {his,practice,covid-19,laboratory,imaging,oncology} |
+ htsjdk | 35 | {bio-dev} |
+ dicom3tools | 23 | {imaging} |
+ dcm2niix | 22 | {imaging} |
dicomscope | 21 | {imaging} |
- gnumed-server | 19 | {practice,covid-19} |
+ gnumed-server | 17 | {practice,covid-19} |
ngs-sdk | 17 | {bio-dev} |
- gdcm | 14 | {covid-19,imaging} |
- gdcm | 13 | {imaging-dev} |
insighttoolkit4 | 13 | {imaging-dev} |
invesalius | 13 | {imaging} |
+ gdcm | 12 | {imaging-dev} |
jebl2 | 12 | {bio-dev} |
- minc-tools | 12 | {imaging} |
- pixelmed | 12 | {imaging} |
- vtk-dicom | 10 | {imaging} |
+ gdcm | 11 | {covid-19,imaging} |
+ minc-tools | 11 | {imaging} |
+ pixelmed | 11 | {imaging} |
lagan | 9 | {bio} |
libdivsufsort | 9 | {bio-dev} |
- openslide | 9 | {imaging} |
+ vtk-dicom | 9 | {imaging} |
adun.app | 8 | {bio} |
- biosig4c++ | 8 | {physics,imaging} |
- king | 8 | {imaging,typesetting} |
melting | 8 | {bio,cloud} |
ngs-sdk | 8 | {bio-dev} |
+ openslide | 8 | {imaging} |
orthanc-webviewer | 8 | {imaging} |
- plastimatch | 8 | {imaging} |
psychopy | 8 | {psychology} |
+ biosig4c++ | 7 | {physics,imaging} |
dicompyler | 7 | {oncology} |
- libminc | 7 | {imaging-dev} |
+ king | 7 | {imaging,typesetting} |
orthanc-dicomweb | 7 | {imaging,covid-19} |
+ plastimatch | 7 | {imaging} |
stacks | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
biojava-live | 6 | {bio-dev} |
ea-utils | 6 | {bio} |
+ libminc | 6 | {imaging-dev} |
librg-utils-perl | 6 | {bio} |
orthanc-mysql | 6 | {imaging} |
paraclu | 6 | {cloud,bio} |
@@ -45,7 +45,6 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
biomaj3-cli | 5 | {cloud} |
fastlink | 5 | {cloud,bio} |
getdata | 5 | {bio} |
- king-probe | 5 | {bio} |
mlv-smile | 5 | {bio,cloud} |
ncbi-seg | 5 | {bio} |
obitools | 5 | {bio} |
@@ -55,12 +54,12 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
rdp-readseq | 5 | {bio} |
sibsim4 | 5 | {bio,cloud} |
sigma-align | 5 | {bio-phylogeny,cloud,bio} |
- staden | 5 | {bio} |
zalign | 5 | {cloud,bio} |
bart-view | 4 | {imaging} |
biomaj3-daemon | 4 | {bio} |
elastix | 4 | {imaging} |
gatb-core | 4 | {bio} |
+ king-probe | 4 | {bio} |
mauve-aligner | 4 | {bio} |
mhap | 4 | {bio-ngs,bio} |
mipe | 4 | {cloud,bio} |
@@ -73,6 +72,7 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
scythe | 4 | {bio} |
spread-phy | 4 | {bio-phylogeny,bio} |
squizz | 4 | {bio,cloud} |
+ staden | 4 | {bio} |
transtermhp | 4 | {bio} |
alter-sequence-alignment | 3 | {bio} |
ampliconnoise | 3 | {cloud,bio} |
@@ -114,7 +114,6 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
bio-tradis | 2 | {bio-dev,bio} |
bitseq | 2 | {bio} |
blasr | 2 | {bio,bio-ngs} |
- blimps | 2 | {bio} |
canu | 2 | {bio} |
centrifuge | 2 | {bio,covid-19} |
clonalframeml | 2 | {bio,covid-19} |
@@ -159,10 +158,8 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
samtools-legacy | 2 | {bio-dev} |
scrm | 2 | {bio} |
segemehl | 2 | {bio} |
- seqan | 2 | {bio-dev} |
seqsero | 2 | {bio} |
sga | 2 | {bio} |
- sift | 2 | {bio} |
soapaligner | 2 | {bio} |
soapsnp | 2 | {bio} |
spaced | 2 | {bio} |
@@ -172,9 +169,9 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
sweed | 2 | {bio} |
yaha | 2 | {bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
+ blimps | 1 | {bio} |
cat-bat | 1 | {bio,covid-19} |
ctn | 1 | {imaging-dev} |
- cufflinks | 1 | {cloud,bio} |
embassy-phylip | 1 | {bio,cloud} |
gatb-core | 1 | {bio-dev} |
htscodecs | 1 | {covid-19,bio-dev} |
@@ -182,7 +179,6 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
libhmsbeagle | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
- opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
oscar | 1 | {practice,tools,data} |
pbcopper | 1 | {bio-dev} |
@@ -192,6 +188,8 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
q2templates | 1 | {bio} |
rambo-k | 1 | {bio} |
relion | 1 | {bio} |
+ seqan | 1 | {bio-dev} |
+ sift | 1 | {bio} |
stringtie | 1 | {bio,covid-19} |
thesias | 1 | {bio,covid-19} |
trace2dbest | 1 | {bio} |
@@ -206,6 +204,7 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
biosig4c++ | 0 | {physics} |
biosyntax | 0 | {bio} |
camp | 0 | {imaging-dev} |
+ cufflinks | 0 | {cloud,bio} |
emboss-explorer | 0 | {bio} |
emmax | 0 | {bio} |
fis-gtm | 0 | {his} |
@@ -246,6 +245,7 @@ Last-Update: Sun, 12 Jul 2020 01:42:04 +0000
murasaki | 0 | {bio} |
nanosv | 0 | {bio,covid-19} |
ngs-sdk | 0 | {bio-dev} |
+ opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2feb769830cb66c17be1e6f3a292c365d33c9ca1
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2feb769830cb66c17be1e6f3a292c365d33c9ca1
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