[med-svn] [Git][med-team/vcfanno][master] 8 commits: routine-update: Standards-Version: 4.5.0

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / vcfanno


Commits:
f32ce346 by Andreas Tille at 2020-07-12T23:16:53+02:00
routine-update: Standards-Version: 4.5.0

- - - - -
74ac570f by Andreas Tille at 2020-07-12T23:16:53+02:00
routine-update: debhelper-compat 13

- - - - -
5f365c18 by Andreas Tille at 2020-07-12T23:16:57+02:00
routine-update: Remove trailing whitespace in debian/changelog

- - - - -
1a1a5976 by Andreas Tille at 2020-07-12T23:16:57+02:00
routine-update: Add salsa-ci file

- - - - -
be04abb2 by Andreas Tille at 2020-07-12T23:16:57+02:00
routine-update: Rules-Requires-Root: no

- - - - -
bef88e40 by Andreas Tille at 2020-07-12T23:16:59+02:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
007bf1d9 by Andreas Tille at 2020-07-12T23:17:00+02:00
Add missing ${misc:Built-Using} to Built-Using on vcfanno.

Changes-By: lintian-brush
Fixes: lintian: missing-built-using-field-for-golang-package
See-also: https://lintian.debian.org/tags/missing-built-using-field-for-golang-package.html

- - - - -
be7ff9bd by Andreas Tille at 2020-07-12T23:18:20+02:00
Cleanup changelog

- - - - -


5 changed files:

- debian/changelog
- − debian/compat
- debian/control
- + debian/salsa-ci.yml
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,11 +1,5 @@
 vcfanno (0.3.2-1) UNRELEASED; urgency=medium
 
   * Initial release (Closes: #<bug>)
-  
-  [Steffen Moeller]
-  
-  * Far from being releaseable, requiring
-    "github.com/brentp/goluaez"
 
  -- Andreas Tille <tille at debian.org>  Wed, 17 Apr 2019 10:48:54 +0200
- 


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-12


=====================================
debian/control
=====================================
@@ -3,7 +3,7 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 12~),
+Build-Depends: debhelper-compat (= 13),
                dh-golang,
                golang-any,
                golang-github-biogo-hts-dev,
@@ -13,18 +13,19 @@ Build-Depends: debhelper (>= 12~),
                golang-github-brentp-vcfgo-dev,
                golang-github-brentp-bix-dev,
                golang-github-shenwei356-xopen-dev,
-               golang-github-biogo-hts-dev,
                golang-github-pkg-errors-dev
-Standards-Version: 4.3.0
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/vcfanno
 Vcs-Git: https://salsa.debian.org/med-team/vcfanno.git
-XS-Go-Import-Path: github.com/brentp/vcfanno
 Homepage: https://github.com/brentp/vcfanno
+Rules-Requires-Root: no
+XS-Go-Import-Path: github.com/brentp/vcfanno
 
 Package: vcfanno
 Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
+Built-Using: ${misc:Built-Using}
 Description: annotate a VCF with other VCFs/BEDs/tabixed files
  Vcfanno allows you to quickly annotate your VCF with any number of INFO
  fields from any number of VCFs or BED files. It uses a simple conf file


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/brentp/vcfanno/issues
+Bug-Submit: https://github.com/brentp/vcfanno/issues/new
 Reference:
  Author: Brent S. Pedersen and Ryan M. Layer and Aaron R. Quinlan
  Title: "Vcfanno: fast, flexible annotation of genetic variants"
@@ -19,3 +21,5 @@ Registry:
    Entry: vcfanno
  - Name: OMICtools
    Entry: OMICS_11863
+Repository: https://github.com/brentp/vcfanno.git
+Repository-Browse: https://github.com/brentp/vcfanno



View it on GitLab: https://salsa.debian.org/med-team/vcfanno/-/compare/3dcc009fe4007f3590b9c97663686e1f9c016db4...be7ff9bd75a34d0fb579271e74d495352c432eae

-- 
View it on GitLab: https://salsa.debian.org/med-team/vcfanno/-/compare/3dcc009fe4007f3590b9c97663686e1f9c016db4...be7ff9bd75a34d0fb579271e74d495352c432eae
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200712/d975c7c6/attachment-0001.html>