Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
66e12bd3 by Andreas Tille at 2020-07-19T13:44:23+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
+Last-Update: Sun, 19 Jul 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
@@ -6,47 +6,47 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
orthanc | 89 | {covid-19,imaging,practice} |
gdcm | 44 | {imaging-dev} |
orthanc-wsi | 43 | {his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 31 | {bio-dev} |
- dcm2niix | 21 | {imaging} |
- dicom3tools | 21 | {imaging} |
- dicomscope | 18 | {imaging} |
- gnumed-server | 17 | {practice,covid-19} |
- ngs-sdk | 15 | {bio-dev} |
- gdcm | 14 | {covid-19,imaging} |
+ htsjdk | 30 | {bio-dev} |
+ dcm2niix | 22 | {imaging} |
+ dicom3tools | 22 | {imaging} |
+ dicomscope | 20 | {imaging} |
+ gnumed-server | 18 | {practice,covid-19} |
+ gdcm | 15 | {covid-19,imaging} |
+ ngs-sdk | 14 | {bio-dev} |
gdcm | 13 | {imaging-dev} |
- insighttoolkit4 | 12 | {imaging-dev} |
+ insighttoolkit4 | 13 | {imaging-dev} |
invesalius | 11 | {imaging} |
jebl2 | 10 | {bio-dev} |
+ minc-tools | 10 | {imaging} |
ngs-sdk | 10 | {bio-dev} |
pixelmed | 10 | {imaging} |
adun.app | 9 | {bio} |
lagan | 9 | {bio} |
- minc-tools | 9 | {imaging} |
+ melting | 9 | {bio,cloud} |
psychopy | 9 | {psychology} |
- libdivsufsort | 8 | {bio-dev} |
- melting | 8 | {bio,cloud} |
+ vtk-dicom | 9 | {imaging} |
orthanc-webviewer | 8 | {imaging} |
- vtk-dicom | 8 | {imaging} |
dicompyler | 7 | {oncology} |
+ libdivsufsort | 7 | {bio-dev} |
libminc | 7 | {imaging-dev} |
openslide | 7 | {imaging} |
orthanc-dicomweb | 7 | {imaging,covid-19} |
plastimatch | 7 | {imaging} |
treeview | 7 | {bio-phylogeny,bio} |
+ bart-view | 6 | {imaging} |
biojava-live | 6 | {bio-dev} |
biomaj3-cli | 6 | {cloud} |
biosig4c++ | 6 | {physics,imaging} |
ea-utils | 6 | {bio} |
+ king | 6 | {imaging,typesetting} |
obitools | 6 | {bio} |
orthanc-mysql | 6 | {imaging} |
paraclu | 6 | {cloud,bio} |
stacks | 6 | {bio} |
anfo | 5 | {bio,cloud} |
- bart-view | 5 | {imaging} |
biomaj3-daemon | 5 | {bio} |
fastlink | 5 | {cloud,bio} |
getdata | 5 | {bio} |
- king | 5 | {imaging,typesetting} |
librg-utils-perl | 5 | {bio} |
mlv-smile | 5 | {bio,cloud} |
orthanc-postgresql | 5 | {imaging} |
@@ -61,6 +61,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
gatb-core | 4 | {bio} |
king-probe | 4 | {bio} |
mauve-aligner | 4 | {bio} |
+ mhap | 4 | {bio-ngs,bio} |
mipe | 4 | {cloud,bio} |
mrs | 4 | {bio} |
ncbi-seg | 4 | {bio} |
@@ -72,6 +73,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
transtermhp | 4 | {bio} |
alter-sequence-alignment | 3 | {bio} |
bandage | 3 | {bio} |
+ brig | 3 | {bio} |
busco | 3 | {covid-19,bio} |
daligner | 3 | {bio-ngs,bio} |
ecopcr | 3 | {bio} |
@@ -84,7 +86,6 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
libncl | 3 | {bio} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
libsbml | 3 | {bio-dev} |
- mhap | 3 | {bio-ngs,bio} |
microbegps | 3 | {bio} |
multiqc | 3 | {bio,covid-19} |
openslide | 3 | {imaging-dev} |
@@ -114,7 +115,6 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
bio-tradis | 2 | {bio-dev,bio} |
bitseq | 2 | {bio} |
blasr | 2 | {bio,bio-ngs} |
- brig | 2 | {bio} |
canu | 2 | {bio} |
centrifuge | 2 | {bio,covid-19} |
clonalframeml | 2 | {bio,covid-19} |
@@ -136,7 +136,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
maffilter | 2 | {bio} |
metaphlan2 | 2 | {bio} |
murasaki | 2 | {bio} |
- ncbi-vdb | 2 | {bio-dev} |
+ ngs-sdk | 2 | {bio-dev} |
patman | 2 | {bio} |
pbdagcon | 2 | {bio} |
phast | 2 | {bio} |
@@ -173,16 +173,13 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
cat-bat | 1 | {bio,covid-19} |
ctn | 1 | {imaging-dev} |
embassy-phylip | 1 | {bio,cloud} |
- gatb-core | 1 | {bio-dev} |
- htscodecs | 1 | {covid-19,bio-dev} |
libdisorder | 1 | {bio-dev} |
libhmsbeagle | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
- ngs-sdk | 1 | {bio-dev} |
+ ncbi-vdb | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
- pbcopper | 1 | {bio-dev} |
phipack | 1 | {bio} |
plasmidseeker | 1 | {bio} |
q2templates | 1 | {bio} |
@@ -206,6 +203,8 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
emboss-explorer | 0 | {bio} |
emmax | 0 | {bio} |
fis-gtm | 0 | {his} |
+ gatb-core | 0 | {bio-dev} |
+ htscodecs | 0 | {covid-19,bio-dev} |
kma | 0 | {bio} |
kmerresistance | 0 | {bio} |
libbigwig | 0 | {bio-dev} |
@@ -245,6 +244,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
parallel-fastq-dump | 0 | {covid-19} |
+ pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
pilercr | 0 | {bio} |
quicktree | 0 | {bio,covid-19,bio-phylogeny} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/66e12bd3ae54bcde57d4b1bc701abeca5ddecf69
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/66e12bd3ae54bcde57d4b1bc701abeca5ddecf69
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