Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ac1385c0 by Andreas Tille at 2020-07-20T13:44:26+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,34 +1,34 @@
-Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
+Last-Update: Mon, 20 Jul 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 171 | {covid-19,imaging} |
orthanc | 89 | {covid-19,imaging,practice} |
- gdcm | 44 | {imaging-dev} |
- orthanc-wsi | 43 | {his,practice,covid-19,laboratory,imaging,oncology} |
+ orthanc-wsi | 42 | {his,practice,covid-19,laboratory,imaging,oncology} |
+ gdcm | 41 | {imaging-dev} |
htsjdk | 30 | {bio-dev} |
+ dicom3tools | 23 | {imaging} |
dcm2niix | 22 | {imaging} |
- dicom3tools | 22 | {imaging} |
- dicomscope | 20 | {imaging} |
+ dicomscope | 19 | {imaging} |
gnumed-server | 18 | {practice,covid-19} |
gdcm | 15 | {covid-19,imaging} |
- ngs-sdk | 14 | {bio-dev} |
+ ngs-sdk | 15 | {bio-dev} |
gdcm | 13 | {imaging-dev} |
- insighttoolkit4 | 13 | {imaging-dev} |
+ insighttoolkit4 | 12 | {imaging-dev} |
invesalius | 11 | {imaging} |
+ ngs-sdk | 11 | {bio-dev} |
jebl2 | 10 | {bio-dev} |
- minc-tools | 10 | {imaging} |
- ngs-sdk | 10 | {bio-dev} |
pixelmed | 10 | {imaging} |
adun.app | 9 | {bio} |
lagan | 9 | {bio} |
melting | 9 | {bio,cloud} |
+ minc-tools | 9 | {imaging} |
psychopy | 9 | {psychology} |
vtk-dicom | 9 | {imaging} |
orthanc-webviewer | 8 | {imaging} |
dicompyler | 7 | {oncology} |
+ king | 7 | {imaging,typesetting} |
libdivsufsort | 7 | {bio-dev} |
- libminc | 7 | {imaging-dev} |
openslide | 7 | {imaging} |
orthanc-dicomweb | 7 | {imaging,covid-19} |
plastimatch | 7 | {imaging} |
@@ -38,13 +38,12 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
biomaj3-cli | 6 | {cloud} |
biosig4c++ | 6 | {physics,imaging} |
ea-utils | 6 | {bio} |
- king | 6 | {imaging,typesetting} |
+ libminc | 6 | {imaging-dev} |
obitools | 6 | {bio} |
orthanc-mysql | 6 | {imaging} |
paraclu | 6 | {cloud,bio} |
- stacks | 6 | {bio} |
- anfo | 5 | {bio,cloud} |
biomaj3-daemon | 5 | {bio} |
+ elastix | 5 | {imaging} |
fastlink | 5 | {cloud,bio} |
getdata | 5 | {bio} |
librg-utils-perl | 5 | {bio} |
@@ -57,7 +56,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
sibsim4 | 5 | {bio,cloud} |
sigma-align | 5 | {bio-phylogeny,cloud,bio} |
zalign | 5 | {cloud,bio} |
- elastix | 4 | {imaging} |
+ anfo | 4 | {bio,cloud} |
gatb-core | 4 | {bio} |
king-probe | 4 | {bio} |
mauve-aligner | 4 | {bio} |
@@ -70,6 +69,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
piler | 4 | {bio} |
scythe | 4 | {bio} |
spread-phy | 4 | {bio-phylogeny,bio} |
+ stacks | 4 | {bio} |
transtermhp | 4 | {bio} |
alter-sequence-alignment | 3 | {bio} |
bandage | 3 | {bio} |
@@ -81,7 +81,6 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
embassy-domainatrix | 3 | {cloud,bio} |
embassy-domalign | 3 | {cloud,bio} |
embassy-domsearch | 3 | {bio,cloud} |
- ghmm | 3 | {bio} |
ipig | 3 | {bio} |
libncl | 3 | {bio} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
@@ -126,6 +125,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
estscan | 2 | {bio} |
fastml | 2 | {bio} |
fsm-lite | 2 | {bio} |
+ ghmm | 2 | {bio} |
harvest-tools | 2 | {bio} |
hinge | 2 | {bio} |
jellyfish1 | 2 | {bio} |
@@ -177,7 +177,6 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
libhmsbeagle | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
- ncbi-vdb | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
phipack | 1 | {bio} |
@@ -187,7 +186,6 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
seqan | 1 | {bio-dev} |
sift | 1 | {bio} |
stringtie | 1 | {bio,covid-19} |
- thesias | 1 | {bio,covid-19} |
trace2dbest | 1 | {bio} |
velvetoptimiser | 1 | {bio} |
volpack | 1 | {imaging-dev} |
@@ -241,6 +239,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
mssstest | 0 | {tools} |
murasaki | 0 | {bio} |
nanosv | 0 | {bio,covid-19} |
+ ncbi-vdb | 0 | {bio-dev} |
opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
parallel-fastq-dump | 0 | {covid-19} |
@@ -248,8 +247,8 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
pbseqlib | 0 | {bio-dev} |
pilercr | 0 | {bio} |
quicktree | 0 | {bio,covid-19,bio-phylogeny} |
- relion | 0 | {bio} |
relion | 0 | {bio-dev} |
+ relion | 0 | {bio} |
sambamba | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
@@ -259,6 +258,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
smrtanalysis | 0 | {covid-19,bio} |
spaln | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
+ thesias | 0 | {bio,covid-19} |
tophat-recondition | 0 | {bio,covid-19} |
varna | 0 | {bio} |
varscan | 0 | {covid-19,bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ac1385c0d9a4e7667d5c9c66fcb3d95d88ade064
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ac1385c0d9a4e7667d5c9c66fcb3d95d88ade064
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