[med-svn] [Git][med-team/libfastahack][master] 8 commits: routine-update: Standards-Version: 4.5.0

Andreas Tille gitlab at salsa.debian.org
Thu Jul 23 13:53:22 BST 2020



Andreas Tille pushed to branch master at Debian Med / libfastahack


Commits:
a6159df1 by Andreas Tille at 2020-07-23T14:46:04+02:00
routine-update: Standards-Version: 4.5.0

- - - - -
585c4e3a by Andreas Tille at 2020-07-23T14:46:04+02:00
routine-update: debhelper-compat 13

- - - - -
807960a1 by Andreas Tille at 2020-07-23T14:46:09+02:00
routine-update: Add salsa-ci file

- - - - -
afd9d422 by Andreas Tille at 2020-07-23T14:46:09+02:00
routine-update: Rules-Requires-Root: no

- - - - -
85da6021 by Andreas Tille at 2020-07-23T14:46:14+02:00
Set upstream metadata fields: Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
1f45898f by Andreas Tille at 2020-07-23T14:49:00+02:00
Remove libfastahack.la from build to make dh_missing happy

- - - - -
d09947d7 by Andreas Tille at 2020-07-23T14:51:20+02:00
Update symbols for gcc-10

- - - - -
8d5553d9 by Andreas Tille at 2020-07-23T14:53:00+02:00
Upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- debian/libfastahack0.symbols
- debian/rules
- + debian/salsa-ci.yml
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,16 @@
+libfastahack (1.0.0+dfsg-6) unstable; urgency=medium
+
+  * Standards-Version: 4.5.0 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * Set upstream metadata fields: Repository, Repository-Browse.
+  * Remove libfastahack.la from build to make dh_missing happy
+  * Update symbols for gcc-10
+    Closes: #957438
+
+ -- Andreas Tille <tille at debian.org>  Thu, 23 Jul 2020 14:51:27 +0200
+
 libfastahack (1.0.0+dfsg-5) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -3,14 +3,15 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                d-shlibs,
                libdisorder-dev,
                help2man
-Standards-Version: 4.4.1
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/libfastahack
 Vcs-Git: https://salsa.debian.org/med-team/libfastahack.git
 Homepage: https://github.com/ekg/fastahack
+Rules-Requires-Root: no
 
 Package: libfastahack0
 Architecture: any


=====================================
debian/libfastahack0.symbols
=====================================
@@ -32,29 +32,23 @@ libfastahack.so.0 libfastahack0 #MINVER#
  _ZN15FastaIndexEntryD1Ev at Base 0.0+git20160702.bbc645f
  _ZN15FastaIndexEntryD2Ev at Base 0.0+git20160702.bbc645f
  _ZNKSt5ctypeIcE8do_widenEc at Base 0.0+git20160702.bbc645f
- _ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE15FastaIndexEntryED1Ev at Base 0.0+git20160702.bbc645f
- _ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE15FastaIndexEntryED2Ev at Base 0.0+git20160702.bbc645f
  _ZNSt6vectorI15FastaIndexEntrySaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_ at Base 0.0+git20160702.bbc645f
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_ at Base 0.0+git20160702.bbc645f
  (optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_ at Base 0.0+git20160702.bbc645f
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC1ERKS7_ at Base 1.0.0+dfsg
+ _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC2ERKS7_ at Base 1.0.0+dfsg
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev at Base 0.0+git20160702.bbc645f
  _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev at Base 0.0+git20160702.bbc645f
- (optional)_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPKcEEvT_S8_St20forward_iterator_tag at Base 0.0+git20160702.bbc645f
- (optional)_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag at Base 0.0+git20160702.bbc645f
- (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE10_M_insert_IS6_IS5_S8_ENSF_11_Alloc_nodeEEESt17_Rb_tree_iteratorIS9_EPSt18_Rb_tree_node_baseSM_OT_RT0_ at Base 0.0+git20160702.bbc645f
- (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSH_PSt13_Rb_tree_nodeIS9_E at Base 0.0+git20160702.bbc645f
- (optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE16_M_insert_uniqueIS6_IS5_S8_EEES6_ISt17_Rb_tree_iteratorIS9_EbEOT_ at Base 0.0+git20160702.bbc645f
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE17_M_emplace_uniqueIJS6_IS5_S8_EEEES6_ISt17_Rb_tree_iteratorIS9_EbEDpOT_ at Base 0.0+git20160702.bbc645f
- _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS7_EESK_IJEEEEESt17_Rb_tree_iteratorIS9_ESt23_Rb_tree_const_iteratorIS9_EDpOT_ at Base 0.0+git20160702.bbc645f
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE24_M_get_insert_unique_posERS7_ at Base 0.0+git20160702.bbc645f
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS9_ERS7_ at Base 0.0+git20160702.bbc645f
- _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE8_M_eraseEPSt13_Rb_tree_nodeIS9_E at Base 0.0+git20160702.bbc645f
- _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_jESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE8_M_eraseEPSt13_Rb_tree_nodeIS8_E at Base 0.0+git20160702.bbc645f
  _ZSt11__push_heapIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEElS2_NS0_5__ops14_Iter_comp_valIPFbS2_S2_EEEEvT_T0_SE_T1_RT2_ at Base 0.0+git20160702.bbc645f
  _ZSt11__remove_ifIPcN9__gnu_cxx5__ops16_Iter_equals_valIKcEEET_S6_S6_T0_ at Base 0.0+git20160702.bbc645f
  _ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEElS2_NS0_5__ops15_Iter_comp_iterIPFbS2_S2_EEEEvT_T0_SE_T1_T2_ at Base 0.0+git20160702.bbc645f
+ _ZSt13__heap_selectIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEENS0_5__ops15_Iter_comp_iterIPFbS2_S2_EEEEvT_SD_SD_T0_ at Base 1.0.0+dfsg
  _ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEENS0_5__ops15_Iter_comp_iterIPFbS2_S2_EEEEvT_SD_T0_ at Base 0.0+git20160702.bbc645f
  _ZSt16__introsort_loopIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEElNS0_5__ops15_Iter_comp_iterIPFbS2_S2_EEEEvT_SD_T0_T1_ at Base 0.0+git20160702.bbc645f
+ _ZSt22__move_median_to_firstIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEENS0_5__ops15_Iter_comp_iterIPFbS2_S2_EEEEvT_SD_SD_SD_T0_ at Base 1.0.0+dfsg
  _ZSt25__unguarded_linear_insertIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_EEEENS0_5__ops14_Val_comp_iterIPFbS2_S2_EEEEvT_T0_ at Base 0.0+git20160702.bbc645f
  _ZlsRSoR10FastaIndex at Base 0.0+git20160702.bbc645f
  _ZlsRSoRK15FastaIndexEntry at Base 0.0+git20160702.bbc645f


=====================================
debian/rules
=====================================
@@ -33,6 +33,7 @@ override_dh_install:
 		    --movedev debian/tmp/usr/include/* usr/include \
 		    --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/$(DEB_HOST_MULTIARCH)/pkgconfig \
 		    debian/tmp/usr/lib/*/*.so
+	find debian -name libfastahack.la -delete
 
 override_dh_makeshlibs:
 ifeq ($(DEB_HOST_ARCH),$(filter $(DEB_HOST_ARCH), amd64 arm64 mips64el ppc64el ia64 kfreebsd-amd64 risc64 sparc64))


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/upstream/metadata
=====================================
@@ -9,3 +9,5 @@ Registry:
   Entry: fastahack
 Bug-Database: https://github.com/ekg/fastahack/issues
 Bug-Submit: https://github.com/ekg/fastahack/issues/new
+Repository: https://github.com/ekg/fastahack.git
+Repository-Browse: https://github.com/ekg/fastahack



View it on GitLab: https://salsa.debian.org/med-team/libfastahack/-/compare/ebaf7c6afa6347977321180bb68d2736330ff873...8d5553d9f2c7419e2ae7389cd4b36ee26300f34d

-- 
View it on GitLab: https://salsa.debian.org/med-team/libfastahack/-/compare/ebaf7c6afa6347977321180bb68d2736330ff873...8d5553d9f2c7419e2ae7389cd4b36ee26300f34d
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