[med-svn] [Git][med-team/multiqc][master] Add list of software to Enhances
Dylan Aïssi
gitlab at salsa.debian.org
Fri Jun 5 10:25:15 BST 2020
Dylan Aïssi pushed to branch master at Debian Med / multiqc
Commits:
84079012 by Dylan Aïssi at 2020-06-05T11:24:57+02:00
Add list of software to Enhances
- - - - -
1 changed file:
- debian/control
Changes:
=====================================
debian/control
=====================================
@@ -50,22 +50,98 @@ Recommends:
libjs-jquery-ui,
node-clipboard,
libjs-filesaver
-Suggests: fastqc,
- fastp,
- bowtie,
- bowtie2,
- trimmomatic,
- hisat2,
- salmon,
- rna-star,
- tophat,
- bamtools,
- bcftools,
- htseq,
- picard-tools,
- rsem,
- samtools,
- vcftools
+Enhances:
+ adapterremoval,
+ afterqc,
+ bamtools,
+ bbmap,
+ bcftools,
+ bcl2fastq,
+ biobambam2,
+ biobloomtools,
+ biscuit,
+ bismark,
+ bowtie,
+ bowtie2,
+ busco,
+ clipandmerge,
+ clusterflow,
+ conpair,
+ cutadapt,
+ damageprofiler,
+ dedup,
+ deeptools,
+ disambiguate,
+ dragen,
+ fastp,
+ fastq_screen,
+ fastqc,
+ featurecounts,
+ fgbio,
+ flash,
+ flexbar,
+ gatk,
+ goleft_indexcov,
+ happy,
+ hicexplorer,
+ hicpro,
+ hicup,
+ hisat2,
+ homer,
+ htseq,
+ interop,
+ ivar,
+ jellyfish,
+ kaiju,
+ kallisto,
+ kat,
+ kraken,
+ leehom,
+ longranger,
+ macs2,
+ malt,
+ methylqa,
+ minionqc,
+ mirtop,
+ mirtrace,
+ mosdepth,
+ mtnucratio,
+ multivcfanalyzer,
+ peddy,
+ phantompeakqualtools,
+ picard-tools,
+ preseq,
+ prokka,
+ pycoqc,
+ qorts,
+ qualimap,
+ quast,
+ rna_seqc,
+ rockhopper,
+ rsem,
+ rseqc,
+ salmon,
+ samblaster,
+ samtools,
+ sargasso,
+ seqyclean,
+ sexdeterrmine,
+ sickle,
+ skewer,
+ slamdunk,
+ snpeff,
+ snpsplit,
+ somalier,
+ sortmerna,
+ stacks,
+ rna-star,
+ supernova,
+ theta2,
+ tophat,
+ trimmomatic,
+ varscan2,
+ vcftools,
+ verifybamid
Description: output integration for RNA sequencing across tools and samples
The sequencing of DNA or RNA with current high-throughput technologies
involves an array of tools and these are applied over a range of samples.
View it on GitLab: https://salsa.debian.org/med-team/multiqc/-/commit/840790128b5ad7f0d02c40cd77da7a52653460aa
--
View it on GitLab: https://salsa.debian.org/med-team/multiqc/-/commit/840790128b5ad7f0d02c40cd77da7a52653460aa
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