[med-svn] [Git][med-team/ivar][master] Cosmetics while sponsoring.

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / ivar


Commits:
8e3d1bc7 by Steffen Moeller at 2020-06-16T19:22:30+02:00
Cosmetics while sponsoring.

- - - - -


3 changed files:

- debian/changelog
- debian/rules
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,5 +1,6 @@
-ivar (1.2.2+dfsg-3) UNRELEASED; urgency=medium
+ivar (1.2.2+dfsg-3) unstable; urgency=medium
 
+  * Team upload.
   * Add reference data for autopkgtests
   * Add recommended package as per docs
   * Add autopkgtests


=====================================
debian/rules
=====================================
@@ -7,3 +7,7 @@ export DEB_BUILD_MAINT_OPTIONS=hardening=+all
 
 %:
 	dh $@
+
+override_dh_auto_clean:
+	rm -f data/db/test_ref.fa.fai data/test.gap.fa data/test.gap.qual.txt data/test.indel.tsv data/test.masked_primer_indices.txt data/test.trimmed.masked.bam data/test.trimmed.masked.bam.bai data/test.trimmed.sorted.bam.bai data/test.unmapped.sorted.bam.bai
+


=====================================
debian/upstream/metadata
=====================================
@@ -1,26 +1,28 @@
 Bug-Database: https://github.com/andersen-lab/ivar/issues
 Bug-Submit: https://github.com/andersen-lab/ivar/issues/new
 Reference:
-  Author: >
+ - Author: >
     Nathan D. Grubaugh and Karthik Gangavarapu and Joshua Quick and
     Nathaniel L. Matteson and Jaqueline Goes De Jesus and Bradley J. Main and
     Amanda L. Tan and Lauren M. Paul and Doug E. Brackney and
     Saran Grewal and Nikos Gurfield and Koen K. A. Van Rompay and
     Sharon Isern and Scott F. Michael and Lark L. Coffey and
-    Nicholas J. Loman and Kristian G. Andersen 
-  Title: >
+    Nicholas J. Loman and Kristian G. Andersen
+   Title: >
     An amplicon-based sequencing framework for accurately measuring intrahost
     virus diversity using PrimalSeq and iVar
-  Journal: Genome Biology
-  Year: 2019
-  Volume: 20
-  Number: 1
-  Pages: 8
-  DOI: 10.1186/s13059-018-1618-7
-  PMID: 30621750
-  PMCID: PMC6325816 
-  URL: https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1618-7
-  eprint: https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-018-1618-7
+   Journal: Genome Biology
+   Year: 2019
+   Volume: 20
+   Number: 1
+   Pages: 8
+   DOI: 10.1186/s13059-018-1618-7
+   PMID: 30621750
+   PMCID: PMC6325816
+   URL: >
+    https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1618-7
+   eprint: >
+    https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-018-1618-7
 Registry:
  - Name: conda:bioconda
    Entry: ivar



View it on GitLab: https://salsa.debian.org/med-team/ivar/-/commit/8e3d1bc7cea5a5d17cc98f9ab4a1525d2a6638b9

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View it on GitLab: https://salsa.debian.org/med-team/ivar/-/commit/8e3d1bc7cea5a5d17cc98f9ab4a1525d2a6638b9
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