[med-svn] [Git][med-team/deepbinner][master] 8 commits: mappy and noise are available now
Andreas Tille
gitlab at salsa.debian.org
Wed Jun 24 12:50:21 BST 2020
Andreas Tille pushed to branch master at Debian Med / deepbinner
Commits:
96402b93 by Andreas Tille at 2020-06-24T13:45:23+02:00
mappy and noise are available now
- - - - -
b8d71c40 by Andreas Tille at 2020-06-24T13:45:47+02:00
routine-update: Standards-Version: 4.5.0
- - - - -
a3ea7b40 by Andreas Tille at 2020-06-24T13:45:47+02:00
routine-update: debhelper-compat 13
- - - - -
16842be4 by Andreas Tille at 2020-06-24T13:45:51+02:00
routine-update: Add salsa-ci file
- - - - -
615f0c22 by Andreas Tille at 2020-06-24T13:45:51+02:00
routine-update: Rules-Requires-Root: no
- - - - -
1284a5c8 by Andreas Tille at 2020-06-24T13:45:57+02:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
- - - - -
d3d78946 by Andreas Tille at 2020-06-24T13:47:32+02:00
Cleanup changelog
- - - - -
3d13de68 by Andreas Tille at 2020-06-24T13:50:07+02:00
Fix copyright
- - - - -
6 changed files:
- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/salsa-ci.yml
- debian/upstream/metadata
Changes:
=====================================
debian/changelog
=====================================
@@ -1,11 +1,7 @@
-deepbinner (0.2.0-1) UNRELEASED; urgency=medium
+deepbinner (0.2.0-1) unstable; urgency=medium
* Initial release (Closes: #<bug>)
TODO:
- 1. python3-tensorflow (see
- https://lists.debian.org/debian-science/2018/12/msg00023.html )
- 2. https://github.com/caseman/noise
- 3. mappy (https://github.com/lh3/minimap2/tree/master/python)
- -> minimap2 is in new
+ 1. python3-tensorflow (Work in progress)
- -- Andreas Tille <tille at debian.org> Mon, 10 Dec 2018 13:34:46 +0100
+ -- Andreas Tille <tille at debian.org> Wed, 24 Jun 2020 13:45:57 +0200
=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11
=====================================
debian/control
=====================================
@@ -3,7 +3,7 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
Uploaders: Andreas Tille <tille at debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 13),
dh-python,
python3,
python3-setuptools,
@@ -11,13 +11,14 @@ Build-Depends: debhelper (>= 11~),
python3-h5py,
python3-numpy,
python3-edlib,
-# python3-mappy,
-# python3-noise,
+ python3-mappy,
+ python3-noise,
# python3-tensorflow
-Standards-Version: 4.2.1
+Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/deepbinner
Vcs-Git: https://salsa.debian.org/med-team/deepbinner.git
Homepage: https://github.com/rrwick/Deepbinner
+Rules-Requires-Root: no
Package: deepbinner
Architecture: any
=====================================
debian/copyright
=====================================
@@ -1,16 +1,24 @@
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Upstream-Name: <pkg>
-Source: <path_to_download>
-Comment: **** Before manually editing this file you should give ****
- scan-copyrights
- **** available in cme + lib-config-model-dpkg-perl ****
- **** package a try. For existing copyright files try ****
- cme update dpkg-copyright
+Upstream-Name: Deepbinner
+Source: https://github.com/rrwick/Deepbinner/releases
Files: *
-Copyright: © 20xx-20yy <upstream>
-License: <license>
+Copyright: 2018 Ryan Wick >rrwick at gmail.com>
+License: GPL-3
Files: debian/*
-Copyright: 2018 Andreas Tille <tille at debian.org>
-License: <license>
+Copyright: 2018-2020 Andreas Tille <tille at debian.org>
+License: GPL-3
+
+License: GPL-3
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ On Debian systems you can find the full text of the GNU General Public
+ License version 3 at /usr/share/common-licenses/GPL-3.
=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/rrwick/Deepbinner/issues
+Bug-Submit: https://github.com/rrwick/Deepbinner/issues/new
Reference:
- Author: Ryan R Wick and Louise M Judd and Kathryn E Holt
Title: >
@@ -20,3 +22,5 @@ Registry:
Entry: deepbinner
- Name: bio.tools
Entry: NA
+Repository: https://github.com/rrwick/Deepbinner.git
+Repository-Browse: https://github.com/rrwick/Deepbinner
View it on GitLab: https://salsa.debian.org/med-team/deepbinner/-/compare/706c5402e42613aed9b628f00f629095fbfb803a...3d13de68b93eeab1085a832c39bfa7991a33cde4
--
View it on GitLab: https://salsa.debian.org/med-team/deepbinner/-/compare/706c5402e42613aed9b628f00f629095fbfb803a...3d13de68b93eeab1085a832c39bfa7991a33cde4
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