[med-svn] [Git][med-team/vg][master] 7 commits: routine-update: New upstream version

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / vg


Commits:
b39c29a7 by Michael R. Crusoe at 2020-06-23T15:20:31+02:00
routine-update: New upstream version

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592ca0fc by Michael R. Crusoe at 2020-06-23T15:20:34+02:00
New upstream version 1.25.0+ds
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d444fa0d by Michael R. Crusoe at 2020-06-23T15:22:14+02:00
Update upstream source from tag 'upstream/1.25.0+ds'

Update to upstream version '1.25.0+ds'
with Debian dir 49dd7fca50f30a017e8535887f63601d47243465
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cce0025d by Michael R. Crusoe at 2020-06-23T15:22:14+02:00
routine-update: debhelper-compat 13

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d73598a8 by Michael R. Crusoe at 2020-06-23T15:50:20+02:00
refresh patches

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6e0db917 by Michael R. Crusoe at 2020-06-25T15:10:01+02:00
fix test loop

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a5a7bde0 by Michael R. Crusoe at 2020-06-25T15:10:37+02:00
1.25.0+ds-1

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30 changed files:

- .gitignore
- .gitlab-ci.yml
- Makefile
- debian/changelog
- debian/control
- debian/patches/better_clean
- debian/patches/no_pg
- debian/patches/simde
- debian/patches/spelling
- debian/patches/use_packaged_fastahack
- debian/patches/use_packaged_htslib
- debian/patches/use_packaged_jemalloc
- debian/patches/use_packaged_rapidjson
- debian/patches/use_packaged_raptor2
- debian/patches/use_packaged_rocksdb
- debian/patches/use_packaged_sparsehash
- debian/patches/use_packaged_ssw
- debian/patches/use_packaged_vcflib
- debian/rules
- + deps/gbwtgraph/.gitmodules
- deps/gbwtgraph/CMakeLists.txt
- deps/gbwtgraph/README.md
- deps/gbwtgraph/algorithms.cpp
- + deps/gbwtgraph/deps/gbwt/.gitignore
- + deps/gbwtgraph/deps/gbwt/.gitmodules
- + deps/gbwtgraph/deps/gbwt/CMakeLists.txt
- + deps/gbwtgraph/deps/gbwt/LICENSE
- + deps/gbwtgraph/deps/gbwt/Makefile
- + deps/gbwtgraph/deps/gbwt/README.md
- + deps/gbwtgraph/deps/gbwt/algorithms.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/vg/-/compare/58258182ea02b14a25e780c1708bb381106f5baa...a5a7bde0b1c3c0a02ed6559cb26989e0ad40df01

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View it on GitLab: https://salsa.debian.org/med-team/vg/-/compare/58258182ea02b14a25e780c1708bb381106f5baa...a5a7bde0b1c3c0a02ed6559cb26989e0ad40df01
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