Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
7fe094e5 by Andreas Tille at 2020-06-26T13:43:02+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,51 +1,52 @@
-Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
+Last-Update: Fri, 26 Jun 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 189 | {imaging,covid-19} |
- orthanc | 95 | {imaging,covid-19,practice} |
+ dcmtk | 186 | {imaging,covid-19} |
+ orthanc | 93 | {imaging,covid-19,practice} |
gdcm | 46 | {imaging-dev} |
- orthanc-wsi | 43 | {practice,laboratory,covid-19,oncology,his,imaging} |
- htsjdk | 33 | {bio-dev} |
- dicomscope | 26 | {imaging} |
+ orthanc-wsi | 42 | {practice,laboratory,covid-19,oncology,his,imaging} |
+ htsjdk | 34 | {bio-dev} |
dcm2niix | 25 | {imaging} |
- dicom3tools | 25 | {imaging} |
+ dicom3tools | 24 | {imaging} |
+ dicomscope | 23 | {imaging} |
gdcm | 21 | {covid-19,imaging} |
- ngs-sdk | 20 | {bio-dev} |
- gnumed-server | 16 | {practice,covid-19} |
+ ngs-sdk | 21 | {bio-dev} |
+ gnumed-server | 17 | {practice,covid-19} |
gdcm | 13 | {imaging-dev} |
invesalius | 13 | {imaging} |
+ jebl2 | 12 | {bio-dev} |
minc-tools | 12 | {imaging} |
adun.app | 11 | {bio} |
insighttoolkit4 | 11 | {imaging-dev} |
- jebl2 | 11 | {bio-dev} |
pixelmed | 11 | {imaging} |
- vsearch | 11 | {bio,covid-19} |
plastimatch | 10 | {imaging} |
biosig4c++ | 9 | {physics,imaging} |
dicompyler | 9 | {oncology} |
king | 9 | {imaging,typesetting} |
openslide | 9 | {imaging} |
- psychopy | 9 | {psychology} |
vtk-dicom | 9 | {imaging} |
librg-utils-perl | 8 | {bio} |
melting | 8 | {bio,cloud} |
ngs-sdk | 8 | {bio-dev} |
obitools | 8 | {bio} |
+ psychopy | 8 | {psychology} |
stacks | 8 | {bio} |
ea-utils | 7 | {bio} |
fastlink | 7 | {bio,cloud} |
+ jaligner | 7 | {bio} |
king-probe | 7 | {bio} |
+ lagan | 7 | {bio} |
ncbi-seg | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
seqsero | 7 | {bio} |
treeview | 7 | {bio,bio-phylogeny} |
biojava-live | 6 | {bio-dev} |
biomaj3-cli | 6 | {cloud} |
- jaligner | 6 | {bio} |
- lagan | 6 | {bio} |
+ brig | 6 | {bio} |
libdivsufsort | 6 | {bio-dev} |
maqview | 6 | {bio} |
+ mhap | 6 | {bio-ngs,bio} |
orthanc-dicomweb | 6 | {covid-19,imaging} |
phyutility | 6 | {bio,cloud} |
sibsim4 | 6 | {bio,cloud} |
@@ -54,12 +55,10 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
staden | 6 | {bio} |
anfo | 5 | {bio,cloud} |
biomaj3-daemon | 5 | {bio} |
- brig | 5 | {bio} |
ecopcr | 5 | {bio} |
getdata | 5 | {bio} |
ghmm | 5 | {bio} |
libminc | 5 | {imaging-dev} |
- mhap | 5 | {bio-ngs,bio} |
microbegps | 5 | {bio} |
mipe | 5 | {bio,cloud} |
mlv-smile | 5 | {bio,cloud} |
@@ -103,6 +102,7 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
openslide | 4 | {imaging-dev} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
+ pal2nal | 4 | {bio} |
perm | 4 | {cloud,bio} |
phast | 4 | {bio} |
placnet | 4 | {bio} |
@@ -147,9 +147,9 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
logol | 3 | {bio} |
metaphlan2 | 3 | {bio} |
mptp | 3 | {bio} |
+ multiqc | 3 | {covid-19,bio} |
nanook | 3 | {covid-19,bio} |
ngs-sdk | 3 | {bio-dev} |
- pal2nal | 3 | {bio} |
patman | 3 | {bio} |
phipack | 3 | {bio} |
phybin | 3 | {bio} |
@@ -183,7 +183,6 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
emboss-explorer | 2 | {bio} |
libctapimkt | 2 | {practice} |
libsbml | 2 | {bio-dev} |
- multiqc | 2 | {covid-19,bio} |
ncbi-vdb | 2 | {bio-dev} |
oscar | 2 | {data,tools,practice} |
papyrus | 2 | {imaging-dev} |
@@ -198,6 +197,7 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
cufflinks | 1 | {cloud,bio} |
gatb-core | 1 | {bio-dev} |
htscodecs | 1 | {bio-dev,covid-19} |
+ kma | 1 | {bio} |
libchado-perl | 1 | {bio-dev} |
libmaus2 | 1 | {covid-19,bio-dev} |
libmialm | 1 | {imaging-dev} |
@@ -226,7 +226,6 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
camp | 0 | {imaging-dev} |
emmax | 0 | {bio} |
fis-gtm | 0 | {his} |
- kma | 0 | {bio} |
kmerresistance | 0 | {bio} |
libbigwig | 0 | {bio-dev} |
libbiod | 0 | {bio-dev} |
@@ -284,5 +283,6 @@ Last-Update: Fri, 26 Jun 2020 01:42:04 +0000
mssstest | -1 | {tools} |
pycoqc | -1 | {covid-19,bio} |
shovill | -1 | {covid-19,bio} |
+ yanagiba | -1 | {covid-19,bio} |
(311 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7fe094e5d7664e0bf34d5d774198818ed1431b19
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7fe094e5d7664e0bf34d5d774198818ed1431b19
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