[med-svn] [Debian Wiki] Update of "DebianMed/SoftwareLiberation" by AndreasTille

Debian Wiki wiki at debian.org
Mon Jun 29 10:40:13 BST 2020


Dear Wiki user,

You have subscribed to a wiki page or wiki category on "Debian Wiki" for change notification.

The "DebianMed/SoftwareLiberation" page has been changed by AndreasTille:
https://wiki.debian.org/DebianMed/SoftwareLiberation?action=diff&rev1=66&rev2=67

Comment:
TRF is now free

  ||[[http://faculty.virginia.edu/wrpearson/fasta/CURRENT/|fasta3]] ||[[https://lists.debian.org/debian-med/2018/04/msg00075.html|Debian Med list]] ||Used freely license of libssw||2020-01-11||
  ||[[https://cran.r-project.org/package=locfit|r-cran-locfit]]     ||[[https://lists.debian.org/debian-med/2012/02/msg00213.html|Debian Med list]] ||License clarified||2020-03-27||
  ||[[http://research-pub.gene.com/gmap/|GMAP]]                     ||[[https://lists.debian.org/debian-med/2017/09/msg00013.html|Debian Med list]] ||License changed to Apache-2.0||2020-04-11||
+ ||[[http://tandem.bu.edu/trf/trf.html|trf]]                       ||[[https://github.com/Benson-Genomics-Lab/TRF|Free code at Github]] ||AGPL || 2020-06-28 ||
  
  == Discussion in progress ==
  ||'''Software'''                                                  ||'''Debian Med contact'''                                       ||'''Status upstream''' || '''Date''' ||
@@ -37, +38 @@

  ||[[http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/|cluster3]] ||[[https://lists.debian.org/debian-med/2020/02/msg00013.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2016/02/msg00000.html|Michiel de Hoon]] || 2020-02-06||
  ||[[http://sift.jcvi.org/|blimps and sift]]                       ||[[https://lists.debian.org/debian-med/2016/01/msg00056.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2016/01/msg00085.html|Pauline Ng]]: Dual license GPL possible || 2016-01-15 ||
  ||[[http://cmpg.unibe.ch/software/fastsimcoal2/|fastsimcoal2]]    ||[[https://groups.google.com/forum/#!topic/fastsimcoal/2MrVmpkhuPw|User forum]]||Laurent Excoffier: "No source code" without arguments||2016-06-23||
- ||[[http://tandem.bu.edu/trf/trf.html|trf]]                       ||[[https://lists.debian.org/debian-med/2016/04/msg00084.html|Debian Med list]], [[https://lists.debian.org/debian-med/2020/05/msg00056.html|COVID-19]] ||[[https://lists.debian.org/debian-med/2017/10/msg00044.html|Yozen Hernandez]] confirmed long term goal to use a free license || 2017-10-12 ||
  ||[[http://prodata.swmed.edu/pcma/pcma.php|pcma]]                 ||[[https://lists.debian.org/debian-med/2017/01/msg00006.html|Debian Med list]] ||No answer yet||2017-01-04||
  ||[[http://www.cbs.dtu.dk/services/SignalP/|SignalP]]             ||[[https://lists.debian.org/debian-med/2017/04/msg00039.html|Debian Med list]] ||No answer yet||2017-04-25||
  ||[[http://exon.gatech.edu/GeneMark/|GeneMark]]                   ||[[https://lists.debian.org/debian-med/2017/04/msg00041.html|Debian Med list]] ||No answer yet||2017-04-25||



More information about the debian-med-commit mailing list