[med-svn] [Git][med-team/libzerg][master] 7 commits: Modify compiling command, use AUTOPKGTEST_TMP

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / libzerg


Commits:
ddafba64 by Nilesh Patra at 2020-03-02T07:53:12+05:30
Modify compiling command, use AUTOPKGTEST_TMP

- - - - -
7077aff2 by Nilesh Patra at 2020-03-02T07:54:19+05:30
Add Build-Depend on libzerg0-dev in symbols file

- - - - -
b7adcf15 by Nilesh Patra at 2020-03-02T07:55:31+05:30
Fix URLs

- - - - -
c94dc6b8 by Nilesh Patra at 2020-03-02T08:00:12+05:30
Drop compat, switch to debhelper-compat

- - - - -
91c23adf by Nilesh Patra at 2020-03-02T08:00:58+05:30
Add "Rules-Requires-Root:no"

- - - - -
2d0b4166 by Nilesh Patra at 2020-03-02T08:05:01+05:30
Bump standards version to 4.5.0

- - - - -
c88087fc by Nilesh Patra at 2020-03-02T08:09:20+05:30
Update changelog

- - - - -


7 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- debian/libzerg0.symbols
- debian/tests/installation-test
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,20 @@
+libzerg (1.0.7-11) unstable; urgency=medium
+
+  * Team Upload.
+
+  [ Steffen Moeller ]
+  * d/u/metadata: yamllint
+
+  [ Nilesh Patra ]
+  * Modify compiling command, use AUTOPKGTEST_TMP
+  * Add Build-Depend on libzerg0-dev in symbols file
+  * Fix URLs
+  * Drop compat, switch to debhelper-compat
+  * Add "Rules-Requires-Root:no"
+  * Bump standards version to 4.5.0
+
+ -- Nilesh Patra <npatra974 at gmail.com>  Mon, 02 Mar 2020 08:01:14 +0530
+
 libzerg (1.0.7-10) unstable; urgency=medium
 
   * debhelper 11
@@ -35,7 +52,7 @@ libzerg (1.0.7-7) unstable; urgency=medium
   * add example files and libzerg0-dev.examples
   * add testsuite
   * mention example file debian/examples/converged.ali in debian/copyright
-  * add README.test for tests and save it to docs for libzerg0-dev, 
+  * add README.test for tests and save it to docs for libzerg0-dev,
     small fixes in debian/examples/example.cpp
   * add hardening
 


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-11


=====================================
debian/control
=====================================
@@ -4,13 +4,14 @@ Uploaders: Laszlo Kajan <lkajan at debian.org>,
            Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 12),
                flex,
                d-shlibs
-Standards-Version: 4.2.1
+Standards-Version: 4.5.0
 Vcs-Browser: https://salsa.debian.org/med-team/libzerg
 Vcs-Git: https://salsa.debian.org/med-team/libzerg.git
 Homepage: https://sourceforge.net/projects/libzerg/
+Rules-Requires-Root: no
 
 Package: libzerg0
 Architecture: any


=====================================
debian/copyright
=====================================
@@ -47,7 +47,7 @@ License: LGPL-3+
  GNU Lesser General Public License for more details.
  . 
  You should have received a copy of the GNU Lesser General Public License
- along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ along with this program.  If not, see <https://www.gnu.org/licenses/>.
  .
  On Debian systems, the complete text of the GNU Lesser General
  Public License version 3 can be found in `/usr/share/common-licenses/LGPL-3'.


=====================================
debian/libzerg0.symbols
=====================================
@@ -1,4 +1,5 @@
 libzerg.so.0 libzerg0 #MINVER#
+* Build-Depends-Package: libzerg0-dev
  zerg_close_file at Base 1.0.7
  zerg_create_buffer at Base 1.0.7
  zerg_delete_buffer at Base 1.0.7


=====================================
debian/tests/installation-test
=====================================
@@ -6,12 +6,12 @@ set -e
 
 pkg=libzerg0-dev
 
-if [ "$ADTTMP" = "" ] ; then
-  ADTTMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
-  trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+if [ "$AUTOPKGTEST_TMP" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
 fi
 
-cd $ADTTMP
+cd $AUTOPKGTEST_TMP
 
 cp -a /usr/share/doc/${pkg}/examples/* .
 find . -type f -name "*.gz" -exec gunzip \{\} \;
@@ -21,7 +21,7 @@ for lnk in `find . -type l -name "*.gz"` ; do
 done
 
 echo "Compile and run..."
-g++ -Wall -lzerg example.cpp -o example
+g++ example.cpp -Wall -lzerg -lm -o example
 [ -s example ]
 [ -x example ]
 ./example converged.ali


=====================================
debian/upstream/metadata
=====================================
@@ -9,8 +9,8 @@ Reference:
    Number: 8
    Pages: 1035-6
    Year: 2003
-   URL: http://bioinformatics.oxfordjournals.org/content/19/8/1035.short
+   URL: https://academic.oup.com/bioinformatics/article/19/8/1035/235371
    ePrint: >
-    http://bioinformatics.oxfordjournals.org/content/19/8/1035.full.pdf+html
+    https://academic.oup.com/bioinformatics/article-pdf/19/8/1035/642766/btg122.pdf
    DOI: 10.1093/bioinformatics/btg122
    PMID: 12761068



View it on GitLab: https://salsa.debian.org/med-team/libzerg/-/compare/a5f68a62725023ecc60cc5d428d3b9ccd7cad62e...c88087fccea66a001253907d327ca3353a1f20d3

-- 
View it on GitLab: https://salsa.debian.org/med-team/libzerg/-/compare/a5f68a62725023ecc60cc5d428d3b9ccd7cad62e...c88087fccea66a001253907d327ca3353a1f20d3
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