Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
2990cf20 by Andreas Tille at 2020-03-11T13:45:12+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,211 +1,219 @@
-Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
+Last-Update: Wed, 11 Mar 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
- dcmtk | 179 | {imaging} |
- orthanc | 101 | {practice,imaging} |
- gdcm | 48 | {imaging-dev} |
- dcm2niix | 41 | {imaging} |
- orthanc-wsi | 38 | {oncology,laboratory,imaging,his,practice} |
- amide | 36 | {imaging} |
- dicom3tools | 31 | {imaging} |
- dicomscope | 31 | {imaging} |
- htsjdk | 27 | {bio-dev} |
- medicalterms | 27 | {tools} |
- gdcm | 21 | {imaging} |
+ dcmtk | 182 | {imaging} |
+ orthanc | 103 | {practice,imaging} |
+ gdcm | 46 | {imaging-dev} |
+ dcm2niix | 42 | {imaging} |
+ orthanc-wsi | 40 | {oncology,laboratory,imaging,his,practice} |
+ amide | 38 | {imaging} |
+ dicom3tools | 32 | {imaging} |
+ dicomscope | 32 | {imaging} |
+ htsjdk | 29 | {bio-dev} |
+ gdcm | 22 | {imaging} |
pixelmed | 18 | {imaging} |
gnumed-server | 17 | {practice} |
- king | 16 | {imaging,typesetting} |
- invesalius | 15 | {imaging} |
- minc-tools | 15 | {imaging} |
- ngs-sdk | 14 | {bio-dev} |
- adun.app | 13 | {bio} |
+ king | 17 | {imaging,typesetting} |
+ invesalius | 16 | {imaging} |
+ minc-tools | 16 | {imaging} |
+ ngs-sdk | 16 | {bio-dev} |
+ adun.app | 14 | {bio} |
+ openslide | 14 | {imaging} |
+ biojava-live | 13 | {bio-dev} |
insighttoolkit4 | 13 | {imaging-dev} |
- openslide | 13 | {imaging} |
vtk-dicom | 13 | {imaging} |
- jebl2 | 11 | {bio-dev} |
- mia | 11 | {imaging} |
- biosig4c++ | 10 | {imaging,physics} |
+ jebl2 | 12 | {bio-dev} |
+ mia | 12 | {imaging} |
+ biosig4c++ | 11 | {imaging,physics} |
+ plastimatch | 11 | {imaging} |
+ tree-puzzle | 11 | {bio,bio-phylogeny,cloud} |
+ gdcm | 10 | {imaging-dev} |
+ librg-utils-perl | 10 | {bio} |
+ ncbi-entrez-direct | 10 | {bio} |
ngs-sdk | 10 | {bio-dev} |
- plastimatch | 10 | {imaging} |
- tree-puzzle | 10 | {bio,bio-phylogeny,cloud} |
- biojava-live | 9 | {bio-dev} |
- gdcm | 9 | {imaging-dev} |
- librg-utils-perl | 9 | {bio} |
- ncbi-entrez-direct | 9 | {bio} |
- fastlink | 8 | {cloud,bio} |
- melting | 8 | {bio,cloud} |
- ncbi-seg | 8 | {bio} |
- norsp | 8 | {bio} |
- psychopy | 8 | {psychology} |
- sortmerna | 8 | {bio} |
- staden | 8 | {bio} |
- arden | 7 | {cloud,bio} |
- cgview | 7 | {bio} |
+ psychopy | 10 | {psychology} |
+ fastlink | 9 | {cloud,bio} |
+ melting | 9 | {bio,cloud} |
+ ncbi-seg | 9 | {bio} |
+ norsp | 9 | {bio} |
+ sortmerna | 9 | {bio} |
+ staden | 9 | {bio} |
+ arden | 8 | {cloud,bio} |
+ cgview | 8 | {bio} |
+ jaligner | 8 | {bio} |
+ maqview | 8 | {bio} |
+ mauve-aligner | 8 | {bio} |
+ mipe | 8 | {bio,cloud} |
+ neobio | 8 | {cloud,bio} |
+ radiant | 8 | {bio} |
+ sigma-align | 8 | {bio-phylogeny,bio,cloud} |
+ ampliconnoise | 7 | {cloud,bio} |
dicompyler | 7 | {oncology} |
- maqview | 7 | {bio} |
- mipe | 7 | {bio,cloud} |
- neobio | 7 | {cloud,bio} |
- obitools | 7 | {bio} |
- radiant | 7 | {bio} |
- sigma-align | 7 | {bio-phylogeny,bio,cloud} |
- ampliconnoise | 6 | {cloud,bio} |
+ phyutility | 7 | {bio,cloud} |
+ piler | 7 | {bio} |
+ rdp-readseq | 7 | {bio} |
+ sibsim4 | 7 | {cloud,bio} |
+ treeview | 7 | {bio-phylogeny,bio} |
+ anfo | 6 | {cloud,bio} |
beast2-mcmc | 6 | {bio} |
- jaligner | 6 | {bio} |
+ biomaj3-cli | 6 | {cloud} |
+ bio-tradis | 6 | {bio-dev,bio} |
+ dazzdb | 6 | {bio} |
+ diamond-aligner | 6 | {bio} |
+ ea-utils | 6 | {bio} |
+ ecopcr | 6 | {bio} |
+ edtsurf | 6 | {bio} |
+ embassy-domainatrix | 6 | {cloud,bio} |
+ embassy-domalign | 6 | {bio,cloud} |
+ embassy-domsearch | 6 | {bio,cloud} |
+ freecontact | 6 | {bio,cloud} |
+ gasic | 6 | {cloud,bio} |
+ idba | 6 | {bio,cloud} |
+ king-probe | 6 | {bio} |
+ libdivsufsort | 6 | {bio-dev} |
libsbml | 6 | {bio-dev} |
- phyutility | 6 | {bio,cloud} |
- piler | 6 | {bio} |
- rdp-readseq | 6 | {bio} |
- sibsim4 | 6 | {cloud,bio} |
- treeview | 6 | {bio-phylogeny,bio} |
+ obitools | 6 | {bio} |
+ paml | 6 | {bio} |
+ paraclu | 6 | {cloud,bio} |
+ perm | 6 | {cloud,bio} |
+ predictprotein | 6 | {bio} |
+ prime-phylo | 6 | {cloud,bio} |
+ probabel | 6 | {bio,cloud} |
+ saint | 6 | {bio} |
+ salmon | 6 | {bio} |
+ seqsero | 6 | {bio} |
+ squizz | 6 | {bio,cloud} |
zalign | 6 | {cloud,bio} |
- anfo | 5 | {cloud,bio} |
- biomaj3-cli | 5 | {cloud} |
- bio-tradis | 5 | {bio-dev,bio} |
- dazzdb | 5 | {bio} |
- ea-utils | 5 | {bio} |
- ecopcr | 5 | {bio} |
- edtsurf | 5 | {bio} |
- embassy-domainatrix | 5 | {cloud,bio} |
- embassy-domalign | 5 | {bio,cloud} |
- embassy-domsearch | 5 | {bio,cloud} |
+ alter-sequence-alignment | 5 | {bio} |
+ assemblytics | 5 | {bio} |
+ bppsuite | 5 | {bio} |
+ brig | 5 | {bio} |
+ codonw | 5 | {bio} |
+ daligner | 5 | {bio-ngs,bio} |
estscan | 5 | {bio} |
- freecontact | 5 | {bio,cloud} |
- gasic | 5 | {cloud,bio} |
- idba | 5 | {bio,cloud} |
- king-probe | 5 | {bio} |
+ fitgcp | 5 | {bio,cloud} |
+ harvest-tools | 5 | {bio} |
+ indelible | 5 | {bio} |
+ ipig | 5 | {bio} |
+ jellyfish1 | 5 | {bio} |
lagan | 5 | {bio} |
+ libncl | 5 | {bio} |
lucy | 5 | {bio} |
- mauve-aligner | 5 | {bio} |
+ mapsembler2 | 5 | {bio,cloud} |
+ mhap | 5 | {bio-ngs,bio} |
+ microbegps | 5 | {bio} |
+ mlv-smile | 5 | {cloud,bio} |
+ murasaki | 5 | {bio} |
orthanc-webviewer | 5 | {imaging} |
- paml | 5 | {bio} |
- paraclu | 5 | {cloud,bio} |
- perm | 5 | {cloud,bio} |
- predictprotein | 5 | {bio} |
- prime-phylo | 5 | {cloud,bio} |
- probabel | 5 | {bio,cloud} |
+ phast | 5 | {bio} |
+ placnet | 5 | {bio} |
+ poretools | 5 | {bio} |
+ proalign | 5 | {bio-phylogeny,bio} |
+ pscan-chip | 5 | {bio} |
+ pscan-tfbs | 5 | {bio} |
pymia | 5 | {imaging-dev} |
- saint | 5 | {bio} |
- salmon | 5 | {bio} |
- squizz | 5 | {bio,cloud} |
- alter-sequence-alignment | 4 | {bio} |
- assemblytics | 4 | {bio} |
- bppsuite | 4 | {bio} |
- brig | 4 | {bio} |
+ scythe | 5 | {bio} |
+ seer | 5 | {bio} |
+ sickle | 5 | {bio} |
+ spread-phy | 5 | {bio-phylogeny,bio} |
+ transtermhp | 5 | {bio} |
+ baitfisher | 4 | {bio} |
+ beads | 4 | {bio} |
+ beast-mcmc | 4 | {bio-phylogeny,bio} |
+ bitseq | 4 | {bio} |
+ canu | 4 | {bio} |
+ centrifuge | 4 | {bio} |
+ clonalorigin | 4 | {bio} |
cluster3 | 4 | {bio} |
- codonw | 4 | {bio} |
- diamond-aligner | 4 | {bio} |
+ dascrubber | 4 | {bio} |
+ elastix | 4 | {imaging} |
elph | 4 | {bio} |
- fitgcp | 4 | {bio,cloud} |
- harvest-tools | 4 | {bio} |
- indelible | 4 | {bio} |
- ipig | 4 | {bio} |
- jellyfish1 | 4 | {bio} |
- libdivsufsort | 4 | {bio-dev} |
+ lamarc | 4 | {bio} |
libgff | 4 | {bio-dev} |
- libncl | 4 | {bio} |
- mapsembler2 | 4 | {bio,cloud} |
- microbegps | 4 | {bio} |
- mlv-smile | 4 | {cloud,bio} |
- murasaki | 4 | {bio} |
+ libpal-java | 4 | {bio-dev} |
+ librdp-taxonomy-tree-java | 4 | {bio-dev} |
+ logol | 4 | {bio} |
+ maffilter | 4 | {bio} |
+ mptp | 4 | {bio} |
openslide | 4 | {imaging-dev} |
parsnp | 4 | {bio} |
- phast | 4 | {bio} |
- placnet | 4 | {bio} |
+ pbdagcon | 4 | {bio} |
+ phipack | 4 | {bio} |
plasmidseeker | 4 | {bio} |
- poretools | 4 | {bio} |
- proalign | 4 | {bio-phylogeny,bio} |
- pscan-chip | 4 | {bio} |
- pscan-tfbs | 4 | {bio} |
+ quorum | 4 | {bio} |
+ rambo-k | 4 | {bio} |
+ rdp-alignment | 4 | {bio} |
+ rdp-classifier | 4 | {bio} |
relion | 4 | {bio} |
- scythe | 4 | {bio} |
- seer | 4 | {bio} |
- seqsero | 4 | {bio} |
- sickle | 4 | {bio} |
- spread-phy | 4 | {bio-phylogeny,bio} |
+ repeatmasker-recon | 4 | {bio} |
+ seqtools | 4 | {bio} |
+ sprai | 4 | {bio} |
tracetuner | 4 | {bio} |
- transtermhp | 4 | {bio} |
+ transrate-tools | 4 | {bio} |
velvetoptimiser | 4 | {bio} |
vsearch | 4 | {bio} |
- baitfisher | 3 | {bio} |
+ abacas | 3 | {bio} |
+ andi | 3 | {bio} |
bandage | 3 | {bio} |
- beast-mcmc | 3 | {bio-phylogeny,bio} |
+ bart-view | 3 | {imaging} |
biomaj3-daemon | 3 | {bio} |
- bitseq | 3 | {bio} |
- canu | 3 | {bio} |
- centrifuge | 3 | {bio} |
- clonalorigin | 3 | {bio} |
- daligner | 3 | {bio-ngs,bio} |
- dascrubber | 3 | {bio} |
+ bio-rainbow | 3 | {bio} |
+ blasr | 3 | {bio-ngs,bio} |
+ clonalframeml | 3 | {bio} |
delly | 3 | {bio} |
- elastix | 3 | {imaging} |
+ dindel | 3 | {bio} |
+ dwgsim | 3 | {bio} |
+ fastml | 3 | {bio} |
+ freebayes | 3 | {bio} |
+ fsm-lite | 3 | {bio} |
gatb-core | 3 | {bio} |
getdata | 3 | {bio} |
ghmm | 3 | {bio} |
- lamarc | 3 | {bio} |
+ hinge | 3 | {bio} |
+ jmodeltest | 3 | {bio-phylogeny,bio} |
libminc | 3 | {imaging-dev} |
- libpal-java | 3 | {bio-dev} |
- librdp-taxonomy-tree-java | 3 | {bio-dev} |
- logol | 3 | {bio} |
- maffilter | 3 | {bio} |
- mhap | 3 | {bio-ngs,bio} |
- mptp | 3 | {bio} |
+ nanook | 3 | {bio} |
orthanc-dicomweb | 3 | {imaging} |
- pbdagcon | 3 | {bio} |
- phipack | 3 | {bio} |
+ patman | 3 | {bio} |
+ phybin | 3 | {bio} |
pilon | 3 | {bio} |
- quorum | 3 | {bio} |
+ prottest | 3 | {bio-phylogeny,bio} |
+ qcumber | 3 | {bio} |
rampler | 3 | {bio} |
- rdp-alignment | 3 | {bio} |
- rdp-classifier | 3 | {bio} |
- repeatmasker-recon | 3 | {bio} |
+ roguenarok | 3 | {bio} |
+ rtax | 3 | {cloud,bio} |
+ runcircos-gui | 3 | {bio} |
samblaster | 3 | {bio} |
segemehl | 3 | {bio} |
- seqtools | 3 | {bio} |
- sprai | 3 | {bio} |
+ sga | 3 | {bio} |
+ snap-aligner | 3 | {bio} |
+ soapaligner | 3 | {bio} |
+ soapsnp | 3 | {bio} |
+ stacks | 3 | {bio} |
+ sumatra | 3 | {bio} |
sweed | 3 | {bio} |
- transrate-tools | 3 | {bio} |
tvc | 3 | {bio} |
yaha | 3 | {bio} |
- abacas | 2 | {bio} |
acedb | 2 | {bio,cloud} |
- andi | 2 | {bio} |
- bart-view | 2 | {imaging} |
- beads | 2 | {bio} |
- bio-rainbow | 2 | {bio} |
biosig4c++ | 2 | {physics,imaging-dev} |
- blasr | 2 | {bio-ngs,bio} |
- clonalframeml | 2 | {bio} |
ctn | 2 | {imaging-dev} |
cufflinks | 2 | {bio,cloud} |
- dindel | 2 | {bio} |
- dwgsim | 2 | {bio} |
- fastml | 2 | {bio} |
- freebayes | 2 | {bio} |
- fsm-lite | 2 | {bio} |
- hinge | 2 | {bio} |
igor | 2 | {bio} |
- jmodeltest | 2 | {bio-phylogeny,bio} |
+ libsmithwaterman | 2 | {bio} |
+ metaphlan2 | 2 | {bio} |
mrs | 2 | {bio} |
- nanook | 2 | {bio} |
opencfu | 2 | {laboratory} |
- patman | 2 | {bio} |
- phybin | 2 | {bio} |
- prottest | 2 | {bio-phylogeny,bio} |
- qcumber | 2 | {bio} |
+ pal2nal | 2 | {bio} |
qrisk2 | 2 | {practice} |
- rambo-k | 2 | {bio} |
relion | 2 | {bio} |
- roguenarok | 2 | {bio} |
- rtax | 2 | {cloud,bio} |
- runcircos-gui | 2 | {bio} |
- sga | 2 | {bio} |
- snap-aligner | 2 | {bio} |
- soapaligner | 2 | {bio} |
- soapsnp | 2 | {bio} |
+ scrm | 2 | {bio} |
+ seqmagick | 2 | {bio} |
+ spaced | 2 | {bio} |
srf | 2 | {bio-dev} |
- stacks | 2 | {bio} |
- sumatra | 2 | {bio} |
+ suitename | 2 | {bio} |
+ sumaclust | 2 | {bio} |
+ surankco | 2 | {bio} |
trace2dbest | 2 | {bio} |
tree-puzzle | 2 | {cloud,bio-phylogeny,bio} |
biosig4c++ | 1 | {physics,imaging-dev} |
@@ -220,31 +228,22 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
libbio-mage-utils-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
libhmsbeagle | 1 | {bio-dev} |
- libsmithwaterman | 1 | {bio} |
libsmithwaterman | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
maxflow | 1 | {imaging-dev} |
- medicalterms | 1 | {tools} |
mencal | 1 | {tools} |
- metaphlan2 | 1 | {bio} |
nutsqlite | 1 | {tools} |
+ opensurgsim | 1 | {imaging-dev} |
orthanc-mysql | 1 | {imaging} |
orthanc-postgresql | 1 | {imaging} |
- pal2nal | 1 | {bio} |
papyrus | 1 | {imaging-dev} |
pilercr | 1 | {bio} |
- python-tinyalign | 1 | {bio-dev,bio} |
samtools-legacy | 1 | {bio-dev} |
- scrm | 1 | {bio} |
- seqmagick | 1 | {bio} |
sift | 1 | {bio} |
skesa | 1 | {bio} |
- spaced | 1 | {bio} |
stringtie | 1 | {bio} |
- suitename | 1 | {bio} |
- sumaclust | 1 | {bio} |
- surankco | 1 | {bio} |
thesias | 1 | {bio} |
+ tnseq-transit | 1 | {bio} |
varscan | 1 | {bio} |
volpack | 1 | {imaging-dev} |
vtk-dicom | 1 | {imaging-dev} |
@@ -295,7 +294,6 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
murasaki | 0 | {bio} |
ncbi-vdb | 0 | {bio-dev} |
ngs-sdk | 0 | {bio-dev} |
- opensurgsim | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
oscar | 0 | {tools,data,practice} |
pbcopper | 0 | {bio-dev} |
@@ -314,8 +312,7 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
smrtanalysis | 0 | {bio} |
solvate | 0 | {bio} |
spaln | 0 | {bio} |
- tnseq-transit | 0 | {bio} |
trim-galore | 0 | {bio} |
varna | 0 | {bio} |
-(345 rows)
+(342 rows)
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
+Last-Update: Wed, 11 Mar 2020 13:42:03 +0000
source | version | upstream_version | uploaders | Last uploader | Last uploaded
-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------
@@ -16,6 +16,7 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
biosig4c++ | 1.9.5 | 2.0.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-02 08:38:37+00
bowtie2 | 2.3.5.1 | 2.4.1 | Alexandre Mestiashvili,Andreas Tille | Michael R. Crusoe | 2019-12-19 16:34:16+00
charls | 2.0.0 | 2.1.0 | Andreas Tille | Andreas Tille | 2019-01-10 20:10:56+00
+ ctdopts | 1.2 | 1.3 | Michael R. Crusoe | Michael R. Crusoe | 2018-02-28 12:34:26+00
cwltool | 2.0.20200224214940 | 2.0.20200303141624 | Michael R. Crusoe | Michael R. Crusoe | 2020-02-26 12:07:54+00
dcm2niix | 1.0.20181125 | 1.0.20190902 | Ghislain Antony Vaillant | Andreas Tille | 2019-01-30 10:04:52+00
ea-utils | 1.1.2 | 1.04.807 | Andreas Tille,Tim Booth | Andreas Tille | 2018-04-26 21:48:01+00
@@ -26,7 +27,7 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
gatb-core | 1.4.1+git20191209.9398f28 | 1.4.1+git20200118.1dc23ff | Andreas Tille,Nadiya Sitdykova | Michael R. Crusoe | 2020-02-17 14:52:30+00
gdcm | 3.0.4 | 3.0.5 | Gert Wollny,Sébastien Jodogne,Steve M. Robbins | Gert Wollny | 2019-11-07 11:49:02+00
hdmf | 1.5.4 | 1.6.1 | Yaroslav Halchenko | Yaroslav Halchenko | 2020-02-03 03:01:25+00
- htsjdk | 2.18.2 | 2.21.2 | Andreas Tille,Charles Plessy,Olivier Sallou,Vincent Danjean | Andreas Tille | 2019-03-01 22:19:40+00
+ htsjdk | 2.18.2 | 2.21.3 | Andreas Tille,Charles Plessy,Olivier Sallou,Vincent Danjean | Andreas Tille | 2019-03-01 22:19:40+00
hyphy | 2.5.1 | 2.5.5 | Andreas Tille | Andreas Tille | 2020-01-07 21:19:50+00
igdiscover | 0.11 | 0.12.2 | Steffen Moeller | Andreas Tille | 2019-09-06 07:04:02+00
igv | 2.4.17 | 2.8.1 | Andreas Tille,Olivier Sallou | Andreas Tille | 2019-01-30 15:11:57+00
@@ -39,7 +40,7 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
libbioparser-dev | 2.0.1 | 2.1.2 | Andreas Tille | Andreas Tille | 2019-07-15 13:35:45+00
libedlib | 1.2.4 | 1.2.6 | Andreas Tille | Andreas Tille | 2019-08-19 00:34:56+00
libgclib | 0.11.4 | 0.11.7 | Andreas Tille,Michael R. Crusoe,Steffen Moeller | Michael R. Crusoe | 2020-02-14 13:04:26+00
- libjloda-java | 0.0+git20180523.cbaf6d1 | 0.0+git20200303.26c9c1f | Andreas Tille | Andreas Tille | 2018-05-25 21:49:43+00
+ libjloda-java | 0.0+git20180523.cbaf6d1 | 0.0+git20200310.2bd973e | Andreas Tille | Andreas Tille | 2018-05-25 21:49:43+00
libmaus2 | 2.0.698 | 2.0.708 | Andreas Tille,Steffen Moeller | Andreas Tille | 2020-02-05 10:04:12+00
libsis-base-java | 18.09~pre1+git20180827.fe4953e | 18.09~pre1+git20180928.45fbd31 | Andreas Tille,Olivier Sallou,Tim Booth | Andreas Tille | 2018-09-26 08:35:30+00
libundead | 1.0.10 | 1.1.1 | Andreas Tille | Andreas Tille | 2019-09-13 21:06:10+00
@@ -51,13 +52,14 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
ncbi-blast+ | 2.9.0 | 2.10.0 | Aaron M. Ucko,Andreas Tille,Olivier Sallou | Aaron M. Ucko | 2020-02-17 01:50:53+00
ncbi-vdb | 2.10.3 | 2.10.4 | Andreas Tille | Andreas Tille | 2020-02-24 21:12:17+00
ngs-sdk | 2.10.2 | 2.10.4 | Andreas Tille,Olivier Sallou,Vincent Danjean | Michael R. Crusoe | 2020-02-17 15:36:45+00
+ nibabel | 3.0.1 | 3.0.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-03 14:58:34+00
pbcopper | 1.3.0 | 1.4.0 | Andreas Tille | Andreas Tille | 2020-01-29 08:51:15+00
pbgenomicconsensus | 2.3.2 | 2.3.3 | Andreas Tille | Liubov Chuprikova | 2019-04-07 15:33:36+00
pbseqlib | 5.3.3 | 5.3.4 | Andreas Tille | Andreas Tille | 2020-01-29 15:04:33+00
picard-tools | 2.18.25 | 2.22.0 | Andreas Tille,Charles Plessy,Olivier Sallou,Steffen Moeller,Vincent Danjean | Andreas Tille | 2019-02-04 09:20:37+00
plink2 | 2.00~a3-200217 | 200308 | Dylan Aïssi | Dylan Aïssi | 2020-02-19 06:19:18+00
prokka | 1.14.5 | 1.14.6 | Andreas Tille,Michael R. Crusoe | Michael R. Crusoe | 2019-12-04 11:00:31+00
- psychopy | 2020.1.1 | 2020.2.3 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-02-24 08:55:42+00
+ psychopy | 2020.1.1 | 2020.1.3 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-02-24 08:55:42+00
pydicom | 1.4.1 | 1.4.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-01-23 12:34:53+00
python-avro | 1.9.1 | 1.9.2 | Afif Elghraoui | Andreas Tille | 2019-12-18 08:41:55+00
python-bids-validator | 1.2.4 | 1.4.4 | Yaroslav Halchenko | Yaroslav Halchenko | 2019-08-17 19:00:11+00
@@ -78,22 +80,26 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
q2templates | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2019-11-14 22:00:17+00
q2-types | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2019-12-23 20:39:42+00
qiime | 2019.10.0 | 2020.2.0 | Andreas Tille,Liubov Chuprikova,Steffen Moeller | Liubov Chuprikova | 2019-12-16 09:51:27+00
+ racon | 1.4.10 | 1.4.11 | Andreas Tille,Cédric Lood | Michael R. Crusoe | 2019-11-12 17:22:24+00
relion | 1.4 | 3.0.8 | Andreas Tille,Goswin von Brederlow,Navid Fehrenbacher,Roland Fehrenbacher | Andreas Tille | 2018-06-14 12:49:40+00
resfinder-db | 0.0+git20191001.149209d | 0.0+git20200213.2a8dd7f | Andreas Tille | Andreas Tille | 2019-11-16 23:00:12+00
salmon | 0.12.0 | 1.1.0 | Kevin Murray,Michael R. Crusoe | Andreas Tille | 2018-12-13 19:05:56+00
+ scrm | 1.7.3 | 1.7.4 | Kevin Murray | Andreas Tille | 2018-12-17 13:05:34+00
seaview | 4.7 | 5.0.1 | Andreas Tille,Charles Plessy | Andreas Tille | 2018-05-09 13:43:40+00
simka | 1.5.1 | 1.5.2 | Shayan Doust | Andreas Tille | 2020-01-12 18:49:47+00
simpleitk | 1.0.1 | 1.2.0 | Ghislain Antony Vaillant | Andreas Tille | 2019-01-30 10:06:08+00
+ skesa | 2.3.0 | 2.4.0 | Andreas Tille | Andreas Tille | 2019-08-20 14:49:33+00
spades | 3.13.1 | 3.14.0 | Alexandre Mestiashvili,Andreas Tille,Michael R. Crusoe,Sascha Steinbiss | Andreas Tille | 2019-11-22 10:05:04+00
spoa | 3.0.1 | 3.0.2 | Andreas Tille | Andreas Tille | 2019-09-16 11:53:05+00
sra-sdk | 2.9.3 | 2.10.4 | Andreas Tille,Charles Plessy | Steffen Moeller | 2018-10-23 20:40:02+00
stacks | 2.41 | 2.52 | Andreas Tille,Tim Booth | Andreas Tille | 2019-07-12 19:11:30+00
sumatra | 1.0.31 | 1.0.34 | Andreas Tille,Tim Booth | Andreas Tille | 2018-10-16 10:06:33+00
t-coffee | 12.00.7fb08c2 | 13.41.0.28bdc39 | Andreas Tille,Steffen Moeller | Andreas Tille | 2019-02-15 07:57:10+00
+ tnseq-transit | 3.0.2 | 3.1.0 | Andreas Tille | Steffen Moeller | 2020-01-18 22:25:05+00
unanimity | 3.3.0 | 4.2.0 | Afif Elghraoui,Andreas Tille | Adrian Bunk | 2019-02-06 07:34:42+00
vsearch | 2.14.1 | 2.14.2 | Andreas Tille,Tim Booth | Andreas Tille | 2019-12-17 10:07:09+00
xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00
-(91 rows)
+(97 rows)
source | id | severity | title
@@ -191,6 +197,7 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
libmaus2 | 934619 | serious | libmaus2 FTBFS (mostly 32bit): error: no matching function for call
librostlab-blast | 832138 | wishlist | librostlab-blast: The package should compile without forcing the older -std=c++03
librostlab-blast | 851472 | normal | librostlab-blast: autopkg test suite failure
+ libsbml | 953584 | serious | libsbml: FTBFS on mipsel
libsis-base-java | 929530 | important | libsis-base-java: unaligned access on armhf
libsis-jhdf5-java | 842815 | serious | libsis-jhdf5-java: FTBFS: java.lang.NoClassDefFoundError: Could not initialize class ch.systemsx.cisd.hdf5.CharacterEncoding
libsis-jhdf5-java | 846735 | serious | libsis-jhdf5-java: FTBFS: java.lang.NoClassDefFoundError: Could not initialize class ch.systemsx.cisd.hdf5.CharacterEncoding
@@ -290,5 +297,5 @@ Last-Update: Wed, 11 Mar 2020 01:42:03 +0000
xmedcon | 671828 | normal | xmedcon: Cannot open file with YBR photometric interpretation
xmedcon | 779707 | normal | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
xmedcon | 924017 | normal | desktop entry
-(192 rows)
+(193 rows)
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2990cf202a6194fb6bb1c2eefd16fdb005f55b4a
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2990cf202a6194fb6bb1c2eefd16fdb005f55b4a
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200311/a336a9e9/attachment-0001.html>