[med-svn] [Git][med-team/plink1-9][master] 3 commits: Bump changelog

[Dylan Aïssi]

Dylan Aïssi pushed to branch master at Debian Med / plink1.9


Commits:
e500885c by Dylan Aïssi at 2020-03-25T16:17:02+01:00
Bump changelog

- - - - -
f4d07830 by Dylan Aïssi at 2020-03-25T16:17:58+01:00
New upstream version 1.90~b6.16-200219
- - - - -
67558f8c by Dylan Aïssi at 2020-03-25T16:18:02+01:00
Update upstream source from tag 'upstream/1.90_b6.16-200219'

Update to upstream version '1.90~b6.16-200219'
with Debian dir 7bf761dba5329d4c00e14d73bd809edd21adb025
- - - - -


4 changed files:

- debian/changelog
- debian/upstream.docs/upstream.changelog
- plink.c
- plink_data.c


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+plink1.9 (1.90~b6.16-200219-1) UNRELEASED; urgency=medium
+
+  * New upstream release.
+
+ -- Dylan Aïssi <daissi at debian.org>  Wed, 25 Mar 2020 16:14:14 +0100
+
 plink1.9 (1.90~b6.16-200217-1) unstable; urgency=medium
 
   * New upstream release.


=====================================
debian/upstream.docs/upstream.changelog
=====================================
@@ -1,6 +1,6 @@
 # Copy/Paste from https://www.cog-genomics.org/plink/1.9/
 
-17 Feb 2020: --bcf now parses header line IDX fields; previously, if e.g. a FILTER key and an INFO key were identical in a BCFv2.2 file, --bcf may have computed the wrong string index for FORMAT:GT, in which case import would fail.
+19 Feb 2020: --bcf now parses header line IDX fields; previously, if e.g. a FILTER key and an INFO key were identical in a BCFv2.2 file, --bcf may have computed the wrong string index for FORMAT:GT, in which case import would fail.
 
 21 Jan: "--extract range" and "--exclude range" no longer error out when their input files contain a chromosome code absent from the current dataset.
 


=====================================
plink.c
=====================================
@@ -105,7 +105,7 @@ static const char ver_str[] =
 #else
   " 32-bit"
 #endif
-  " (17 Feb 2020)";
+  " (19 Feb 2020)";
 static const char ver_str2[] =
   // include leading space if day < 10, so character length stays the same
   ""


=====================================
plink_data.c
=====================================
@@ -9085,7 +9085,8 @@ int32_t bcf_header_line_idx_check(char* line_iter, char* line_end, uint32_t* gt_
     if (cc == ',') {
       continue;
     }
-    if (cc == '\n') {
+    // bugfix (19 Feb 2020)
+    if (cc == '>') {
       return 0;
     }
     break;



View it on GitLab: https://salsa.debian.org/med-team/plink1-9/-/compare/23318f2d456b0ab6b0f4af1fc649a8e33117dca9...67558f8c437eb1bf513f57a844ab2bbdc43b7892

-- 
View it on GitLab: https://salsa.debian.org/med-team/plink1-9/-/compare/23318f2d456b0ab6b0f4af1fc649a8e33117dca9...67558f8c437eb1bf513f57a844ab2bbdc43b7892
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